RNA–Protein interactions for RNA: ENST00000619121.4

CSMD2-210, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD2, Length 13,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-210ENST00000619121 FAM9AQ8IZU1 332 aaPredicted RBP11.91□□□□□ -0.5
CSMD2-210ENST00000619121 NISCHQ9Y2I1 1504 aa11.71□□□□□ -0.53
CSMD2-210ENST00000619121 PELP1Q8IZL8 1130 aaKnown RBP11.69□□□□□ -0.54
CSMD2-210ENST00000619121 DCAF8L2P0C7V8 631 aa11.6□□□□□ -0.55
CSMD2-210ENST00000619121 APLP2Q06481 763 aa11.27□□□□□ -0.61
CSMD2-210ENST00000619121 CCER1Q8TC90 406 aaPredicted RBP11.15□□□□□ -0.63
CSMD2-210ENST00000619121 YTHDC1Q96MU7 727 aaKnown RBP10.92□□□□□ -0.66
CSMD2-210ENST00000619121 ZEB1P37275 1124 aaPredicted RBP10.91□□□□□ -0.66
CSMD2-210ENST00000619121 MYT1Q01538 1121 aa10.82□□□□□ -0.68
CSMD2-210ENST00000619121 SUPT5HO00267 1087 aaKnown RBP10.72□□□□□ -0.69
CSMD2-210ENST00000619121 CENPBP07199 599 aaPredicted RBP10.66□□□□□ -0.7
CSMD2-210ENST00000619121 ERICH6Q7L0X2 663 aa10.63□□□□□ -0.71
CSMD2-210ENST00000619121 NEFLP07196 543 aa10.54□□□□□ -0.72
CSMD2-210ENST00000619121 DAXXQ9UER7 740 aaPredicted RBP10.44□□□□□ -0.74
CSMD2-210ENST00000619121 NEFMP07197 916 aa10.44□□□□□ -0.74
CSMD2-210ENST00000619121 ACIN1Q9UKV3 1341 aaKnown RBP10.44□□□□□ -0.74
CSMD2-210ENST00000619121 TRIM41Q8WV44 630 aa10.43□□□□□ -0.74
CSMD2-210ENST00000619121 CCDC180Q9P1Z9 1646 aa10.42□□□□□ -0.74
CSMD2-210ENST00000619121 UBTFP17480 764 aaKnown RBP10.35□□□□□ -0.75
CSMD2-210ENST00000619121 SHROOM4Q9ULL8 1493 aa10.35□□□□□ -0.75
CSMD2-210ENST00000619121 ATP1B4Q9UN42 357 aaPredicted RBP10.31□□□□□ -0.76
CSMD2-210ENST00000619121 MYT1LQ9UL68 1186 aa10.25□□□□□ -0.77
CSMD2-210ENST00000619121 ZBTB47Q9UFB7 747 aaPredicted RBP10.17□□□□□ -0.78
CSMD2-210ENST00000619121 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.12□□□□□ -0.79
CSMD2-210ENST00000619121 HNRNPUL2Q1KMD3 747 aaKnown RBP10.12□□□□□ -0.79
CSMD2-210ENST00000619121 EIF5BO60841 1220 aaKnown RBP10.12□□□□□ -0.79
CSMD2-210ENST00000619121 CDK11AQ9UQ88 783 aaPredicted RBP10.11□□□□□ -0.79
CSMD2-210ENST00000619121 CLSPNQ9HAW4 1339 aa10.1□□□□□ -0.79
CSMD2-210ENST00000619121 TRIM26Q12899 539 aaPredicted RBP10.08□□□□□ -0.8
CSMD2-210ENST00000619121 EHMT2Q96KQ7 1210 aa10.08□□□□□ -0.8
CSMD2-210ENST00000619121 PCGF6Q9BYE7 350 aa10.05□□□□□ -0.8
CSMD2-210ENST00000619121 ZNF316A6NFI3 1004 aaPredicted RBP10.05□□□□□ -0.8
CSMD2-210ENST00000619121 SLC24A1O60721 1099 aa10.05□□□□□ -0.8
CSMD2-210ENST00000619121 ESF1Q9H501 851 aaKnown RBP10□□□□□ -0.81
CSMD2-210ENST00000619121 RB1CC1Q8TDY2 1594 aa9.99□□□□□ -0.81
CSMD2-210ENST00000619121 RTL5Q5HYW3 569 aaPredicted RBP9.97□□□□□ -0.81
CSMD2-210ENST00000619121 NPM1P06748 294 aaKnown RBP eCLIP9.92□□□□□ -0.82
CSMD2-210ENST00000619121 ANP32BQ92688 251 aaKnown RBP9.92□□□□□ -0.82
CSMD2-210ENST00000619121 SLC4A1APQ9BWU0 796 aaKnown RBP9.9□□□□□ -0.83
CSMD2-210ENST00000619121 NACADO15069 1562 aa9.89□□□□□ -0.83
CSMD2-210ENST00000619121 TTBK1Q5TCY1 1321 aaPredicted RBP9.87□□□□□ -0.83
CSMD2-210ENST00000619121 ANO8Q9HCE9 1232 aaPredicted RBP9.86□□□□□ -0.83
CSMD2-210ENST00000619121 RANGAP1P46060 587 aaPredicted RBP9.82□□□□□ -0.84
CSMD2-210ENST00000619121 UPF2Q9HAU5 1272 aaKnown RBP9.81□□□□□ -0.84
CSMD2-210ENST00000619121 ANP32CO43423 234 aa9.81□□□□□ -0.84
CSMD2-210ENST00000619121 ANP32EQ9BTT0 268 aa9.8□□□□□ -0.84
CSMD2-210ENST00000619121 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.78□□□□□ -0.84
CSMD2-210ENST00000619121 CDK11BP21127 795 aaKnown RBP9.76□□□□□ -0.85
CSMD2-210ENST00000619121 CHMP4BQ9H444 224 aaKnown RBP9.74□□□□□ -0.85
CSMD2-210ENST00000619121 EEA1Q15075 1411 aa9.74□□□□□ -0.85
CSMD2-210ENST00000619121 NPM2Q86SE8 214 aaKnown RBP9.74□□□□□ -0.85
CSMD2-210ENST00000619121 BCANQ96GW7 911 aa9.73□□□□□ -0.85
CSMD2-210ENST00000619121 CFAP44Q96MT7 982 aa9.73□□□□□ -0.85
CSMD2-210ENST00000619121 CDCA8Q53HL2 280 aa9.73□□□□□ -0.85
CSMD2-210ENST00000619121 TRIM52Q96A61 297 aa9.72□□□□□ -0.85
CSMD2-210ENST00000619121 STAG3Q9UJ98 1225 aa9.72□□□□□ -0.85
CSMD2-210ENST00000619121 ABCC9O60706 1549 aa9.71□□□□□ -0.85
CSMD2-210ENST00000619121 CANXP27824 592 aaKnown RBP9.71□□□□□ -0.86
CSMD2-210ENST00000619121 CHMP4AQ9BY43 222 aa9.71□□□□□ -0.86
CSMD2-210ENST00000619121 RSF1Q96T23 1441 aaPredicted RBP9.7□□□□□ -0.86
CSMD2-210ENST00000619121 HDGFP51858 240 aaKnown RBP9.7□□□□□ -0.86
CSMD2-210ENST00000619121 FAM50AQ14320 339 aaKnown RBP9.69□□□□□ -0.86
CSMD2-210ENST00000619121 POLR3GLQ9BT43 218 aa9.69□□□□□ -0.86
CSMD2-210ENST00000619121 PNNQ9H307 717 aaKnown RBP9.68□□□□□ -0.86
CSMD2-210ENST00000619121 AEBP2Q6ZN18 517 aaPredicted RBP9.67□□□□□ -0.86
CSMD2-210ENST00000619121 EIF4G2P78344 907 aaKnown RBP eCLIP9.66□□□□□ -0.86
CSMD2-210ENST00000619121 HAP1P54257 671 aaPredicted RBP9.65□□□□□ -0.86
CSMD2-210ENST00000619121 CSRNP3Q8WYN3 585 aa9.65□□□□□ -0.86
CSMD2-210ENST00000619121 ANP32AP39687 249 aaKnown RBP9.64□□□□□ -0.87
CSMD2-210ENST00000619121 MYH16Q9H6N6 1097 aa9.63□□□□□ -0.87
CSMD2-210ENST00000619121 TSPY4P0CV99 314 aa9.63□□□□□ -0.87
CSMD2-210ENST00000619121 TSPY10P0CW01 314 aa9.63□□□□□ -0.87
CSMD2-210ENST00000619121 HSP90AA1P07900 732 aaKnown RBP9.62□□□□□ -0.87
CSMD2-210ENST00000619121 GLIPR1L2Q4G1C9 344 aa9.62□□□□□ -0.87
CSMD2-210ENST00000619121 CEP162Q5TB80 1403 aa9.62□□□□□ -0.87
CSMD2-210ENST00000619121 ITGAEP38570 1179 aa9.6□□□□□ -0.87
CSMD2-210ENST00000619121 DCAF1Q9Y4B6 1507 aa9.59□□□□□ -0.87
CSMD2-210ENST00000619121 SCRIBQ14160 1630 aa9.59□□□□□ -0.87
CSMD2-210ENST00000619121 FBLN2P98095 1184 aa9.59□□□□□ -0.87
CSMD2-210ENST00000619121 L1TD1Q5T7N2 865 aaKnown RBP9.57□□□□□ -0.88
CSMD2-210ENST00000619121 ZCCHC6Q5VYS8 1495 aaKnown RBP9.57□□□□□ -0.88
CSMD2-210ENST00000619121 MS4A1P11836 297 aa9.56□□□□□ -0.88
CSMD2-210ENST00000619121 CASC1Q6TDU7 716 aa9.56□□□□□ -0.88
CSMD2-210ENST00000619121 HMGB2P26583 209 aaKnown RBP9.56□□□□□ -0.88
CSMD2-210ENST00000619121 ARID4BQ4LE39 1312 aaPredicted RBP9.56□□□□□ -0.88
CSMD2-210ENST00000619121 DIEXFQ68CQ4 756 aaKnown RBP9.55□□□□□ -0.88
CSMD2-210ENST00000619121 TONSLQ96HA7 1378 aa9.54□□□□□ -0.88
CSMD2-210ENST00000619121 NEUROD1Q13562 356 aa9.54□□□□□ -0.88
CSMD2-210ENST00000619121 CHIC1Q5VXU3 224 aa9.54□□□□□ -0.88
CSMD2-210ENST00000619121 CLIP1P30622 1438 aa9.53□□□□□ -0.88
CSMD2-210ENST00000619121 FHAD1B1AJZ9 1412 aa9.52□□□□□ -0.89
CSMD2-210ENST00000619121 HRCP23327 699 aa9.52□□□□□ -0.89
CSMD2-210ENST00000619121 BAZ1AQ9NRL2 1556 aaPredicted RBP9.52□□□□□ -0.89
CSMD2-210ENST00000619121 USP35Q9P2H5 1018 aa9.52□□□□□ -0.89
CSMD2-210ENST00000619121 CHMP7Q8WUX9 453 aaPredicted RBP9.51□□□□□ -0.89
CSMD2-210ENST00000619121 GOLGA6L22H0YM25 854 aa9.51□□□□□ -0.89
CSMD2-210ENST00000619121 SMARCA2P51531 1590 aa9.51□□□□□ -0.89
CSMD2-210ENST00000619121 MYO15BQ96JP2 1530 aa9.51□□□□□ -0.89
CSMD2-210ENST00000619121 SCAF1Q9H7N4 1312 aaKnown RBP9.51□□□□□ -0.89
CSMD2-210ENST00000619121 NRDCO43847 1150 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms