Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC8.53□□□□□ -1.04
CDC42BPAQ5VT25 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC8.53□□□□□ -1.04
CDC42BPAQ5VT25 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC8.53□□□□□ -1.04
CDC42BPAQ5VT25 RPL10P14-201ENST00000565265 298 ntBASIC8.53□□□□□ -1.04
CDC42BPAQ5VT25 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC8.53□□□□□ -1.04
CDC42BPAQ5VT25 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC8.53□□□□□ -1.04
CDC42BPAQ5VT25 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC8.53□□□□□ -1.04
CDC42BPAQ5VT25 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42BPAQ5VT25 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42BPAQ5VT25 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42BPAQ5VT25 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42BPAQ5VT25 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42BPAQ5VT25 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC8.53□□□□□ -1.04
CDC42BPAQ5VT25 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42BPAQ5VT25 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
CDC42BPAQ5VT25 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.04
CDC42BPAQ5VT25 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.04
CDC42BPAQ5VT25 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
CDC42BPAQ5VT25 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.04
CDC42BPAQ5VT25 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
CDC42BPAQ5VT25 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42BPAQ5VT25 RNA5SP443-201ENST00000363083 132 ntBASIC8.52□□□□□ -1.05
CDC42BPAQ5VT25 RNA5SP326-201ENST00000363209 110 ntBASIC8.52□□□□□ -1.05
CDC42BPAQ5VT25 RNA5SP91-201ENST00000390902 119 ntBASIC8.52□□□□□ -1.05
CDC42BPAQ5VT25 AL133270.1-201ENST00000402635 279 ntBASIC8.52□□□□□ -1.05
CDC42BPAQ5VT25 OR4K12P-201ENST00000406538 961 ntBASIC8.52□□□□□ -1.05
CDC42BPAQ5VT25 RNA5SP251-201ENST00000410614 137 ntBASIC8.52□□□□□ -1.05
CDC42BPAQ5VT25 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC8.52□□□□□ -1.05
CDC42BPAQ5VT25 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC8.52□□□□□ -1.05
CDC42BPAQ5VT25 RN7SL51P-201ENST00000468230 285 ntBASIC8.52□□□□□ -1.05
CDC42BPAQ5VT25 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC8.52□□□□□ -1.05
CDC42BPAQ5VT25 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42BPAQ5VT25 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
CDC42BPAQ5VT25 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42BPAQ5VT25 TANK-205ENST00000405852 2155 ntTSL 5 BASIC8.52□□□□□ -1.05
CDC42BPAQ5VT25 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
CDC42BPAQ5VT25 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42BPAQ5VT25 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
CDC42BPAQ5VT25 CAST-202ENST00000325674 3356 ntTSL 5 BASIC8.52□□□□□ -1.05
CDC42BPAQ5VT25 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC8.52□□□□□ -1.05
CDC42BPAQ5VT25 RN7SKP104-201ENST00000362605 328 ntBASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 RBMY2KP-201ENST00000418221 992 ntBASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 AC073410.1-201ENST00000435125 589 ntBASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 RPL7P45-201ENST00000455851 743 ntBASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 AC004453.1-201ENST00000487895 408 ntBASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 AC096754.1-201ENST00000508904 818 ntBASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 AC147055.3-201ENST00000510547 851 ntBASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 AC127381.1-201ENST00000555979 939 ntBASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 AL049539.1-201ENST00000611964 459 ntBASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 U3.36-201ENST00000408418 213 ntBASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 RPL23AP18-201ENST00000416139 468 ntBASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 RBMY2QP-201ENST00000429799 1147 ntBASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 AK3P5-201ENST00000432033 519 ntBASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 RPL7P61-201ENST00000451721 751 ntBASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 RPL7P39-201ENST00000481157 744 ntBASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 AL121594.2-201ENST00000541658 472 ntBASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 AC087763.1-201ENST00000603391 286 ntBASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC8.51□□□□□ -1.05
CDC42BPAQ5VT25 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42BPAQ5VT25 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42BPAQ5VT25 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42BPAQ5VT25 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC8.5□□□□□ -1.05
CDC42BPAQ5VT25 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42BPAQ5VT25 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42BPAQ5VT25 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42BPAQ5VT25 AC009784.1-201ENST00000426484 460 ntBASIC8.5□□□□□ -1.05
CDC42BPAQ5VT25 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42BPAQ5VT25 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC8.5□□□□□ -1.05
CDC42BPAQ5VT25 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC8.5□□□□□ -1.05
CDC42BPAQ5VT25 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC8.5□□□□□ -1.05
CDC42BPAQ5VT25 AL163952.1-202ENST00000569625 600 ntBASIC8.5□□□□□ -1.05
CDC42BPAQ5VT25 OR1F2P-201ENST00000570470 933 ntBASIC8.5□□□□□ -1.05
CDC42BPAQ5VT25 SETP3-201ENST00000581726 813 ntBASIC8.5□□□□□ -1.05
CDC42BPAQ5VT25 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC8.5□□□□□ -1.05
CDC42BPAQ5VT25 SAMMSON-209ENST00000641222 1100 ntBASIC8.5□□□□□ -1.05
CDC42BPAQ5VT25 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC8.5□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms