Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 PRPS1P2-201ENST00000430496 937 ntBASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 PCNPP2-201ENST00000441651 455 ntBASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 OR7E125P-201ENST00000443450 846 ntBASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 PYM1-204ENST00000454792 884 ntTSL 2 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 AC115223.1-201ENST00000466377 870 ntBASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 RN7SL569P-201ENST00000494652 288 ntBASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 AC114967.1-201ENST00000504890 259 ntBASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 HMGB1P44-201ENST00000508597 572 ntBASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 ATP1B1P1-201ENST00000509767 915 ntBASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 AC091133.4-201ENST00000511142 308 ntBASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 AC022690.1-201ENST00000526681 550 ntBASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 OR5AQ1P-201ENST00000527596 927 ntBASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 OR7E1P-201ENST00000533891 958 ntBASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 MIR4795-201ENST00000584182 89 ntBASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 AC069499.2-201ENST00000610665 382 ntBASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
LYSMD3Q7Z3D4 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.71□□□□□ -1.17
LYSMD3Q7Z3D4 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC7.71□□□□□ -1.17
LYSMD3Q7Z3D4 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC7.71□□□□□ -1.17
LYSMD3Q7Z3D4 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
LYSMD3Q7Z3D4 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
LYSMD3Q7Z3D4 PABPC1P9-201ENST00000426076 1612 ntBASIC7.71□□□□□ -1.17
LYSMD3Q7Z3D4 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
LYSMD3Q7Z3D4 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
LYSMD3Q7Z3D4 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 LINC01142-201ENST00000440404 1457 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 SLC2A3P4-201ENST00000521259 1471 ntBASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 RNA5SP18-201ENST00000390935 121 ntBASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 RNA5SP297-201ENST00000391029 113 ntBASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 KRT18P52-201ENST00000404956 846 ntBASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 AC003071.2-201ENST00000423857 315 ntBASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 FBP2P1-202ENST00000424473 530 ntBASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 AL590682.1-201ENST00000437248 344 ntBASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 ARMC4P1-201ENST00000438905 707 ntBASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 RAB28P3-201ENST00000448325 597 ntBASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 RPS27AP2-201ENST00000457576 465 ntBASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 PNPLA4P1-201ENST00000458328 305 ntBASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 RN7SL19P-201ENST00000462522 306 ntBASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 MTND1P16-201ENST00000465177 898 ntBASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 FTH1P23-201ENST00000492727 550 ntBASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 RN7SL445P-201ENST00000495609 293 ntBASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 CCDC11P1-201ENST00000503137 1162 ntBASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 SUMO2P17-201ENST00000504438 285 ntBASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 ENPP7P3-201ENST00000509123 241 ntBASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 RNU6ATAC39P-201ENST00000516309 149 ntBASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC7.71□□□□□ -1.18
LYSMD3Q7Z3D4 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms