Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA9Q9Y5G4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PCDHGA9Q9Y5G4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGA9Q9Y5G4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
PCDHGA9Q9Y5G4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA9Q9Y5G4 AC007952.6-201ENST00000573168 2673 ntBASIC18.44■□□□□ 0.54
PCDHGA9Q9Y5G4 AC003957.1-201ENST00000625108 2673 ntBASIC18.44■□□□□ 0.54
PCDHGA9Q9Y5G4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA9Q9Y5G4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA9Q9Y5G4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA9Q9Y5G4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA9Q9Y5G4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA9Q9Y5G4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA9Q9Y5G4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA9Q9Y5G4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.43■□□□□ 0.54
PCDHGA9Q9Y5G4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHGA9Q9Y5G4 AL049796.1-201ENST00000565336 1766 ntBASIC18.43■□□□□ 0.54
PCDHGA9Q9Y5G4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA9Q9Y5G4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA9Q9Y5G4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHGA9Q9Y5G4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA9Q9Y5G4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA9Q9Y5G4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA9Q9Y5G4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA9Q9Y5G4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHGA9Q9Y5G4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.43■□□□□ 0.54
PCDHGA9Q9Y5G4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHGA9Q9Y5G4 AC005363.2-201ENST00000618631 242 ntBASIC18.43■□□□□ 0.54
PCDHGA9Q9Y5G4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHGA9Q9Y5G4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA9Q9Y5G4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PCDHGA9Q9Y5G4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA9Q9Y5G4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
PCDHGA9Q9Y5G4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA9Q9Y5G4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA9Q9Y5G4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHGA9Q9Y5G4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHGA9Q9Y5G4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHGA9Q9Y5G4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA9Q9Y5G4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PCDHGA9Q9Y5G4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA9Q9Y5G4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHGA9Q9Y5G4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PCDHGA9Q9Y5G4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDHGA9Q9Y5G4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.42■□□□□ 0.54
PCDHGA9Q9Y5G4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDHGA9Q9Y5G4 REXO1L10P-201ENST00000615707 1290 ntBASIC18.42■□□□□ 0.54
PCDHGA9Q9Y5G4 MIR6786-201ENST00000616843 113 ntBASIC18.42■□□□□ 0.54
PCDHGA9Q9Y5G4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.42■□□□□ 0.54
PCDHGA9Q9Y5G4 AL590326.2-201ENST00000625139 305 ntBASIC18.42■□□□□ 0.54
PCDHGA9Q9Y5G4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHGA9Q9Y5G4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHGA9Q9Y5G4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA9Q9Y5G4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA9Q9Y5G4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA9Q9Y5G4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA9Q9Y5G4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
PCDHGA9Q9Y5G4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA9Q9Y5G4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA9Q9Y5G4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHGA9Q9Y5G4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA9Q9Y5G4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA9Q9Y5G4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGA9Q9Y5G4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA9Q9Y5G4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
PCDHGA9Q9Y5G4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHGA9Q9Y5G4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA9Q9Y5G4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA9Q9Y5G4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGA9Q9Y5G4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA9Q9Y5G4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA9Q9Y5G4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
PCDHGA9Q9Y5G4 HLA-G-202ENST00000376815 851 ntBASIC18.41■□□□□ 0.54
PCDHGA9Q9Y5G4 HLA-G-203ENST00000376818 1127 ntBASIC18.41■□□□□ 0.54
PCDHGA9Q9Y5G4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHGA9Q9Y5G4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDHGA9Q9Y5G4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGA9Q9Y5G4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA9Q9Y5G4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA9Q9Y5G4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PCDHGA9Q9Y5G4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGA9Q9Y5G4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PCDHGA9Q9Y5G4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA9Q9Y5G4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
PCDHGA9Q9Y5G4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA9Q9Y5G4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA9Q9Y5G4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHGA9Q9Y5G4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA9Q9Y5G4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PCDHGA9Q9Y5G4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA9Q9Y5G4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHGA9Q9Y5G4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
PCDHGA9Q9Y5G4 KRT18P35-201ENST00000510488 1269 ntBASIC18.4■□□□□ 0.54
PCDHGA9Q9Y5G4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDHGA9Q9Y5G4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.4■□□□□ 0.54
PCDHGA9Q9Y5G4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGA9Q9Y5G4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDHGA9Q9Y5G4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA9Q9Y5G4 AL031963.3-201ENST00000606441 850 ntBASIC18.4■□□□□ 0.54
PCDHGA9Q9Y5G4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms