Protein–RNA interactions for Protein: Q9UN66

PCDHB8, Protocadherin beta-8, humanhuman

Predictions only

Length 801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8Q9UN66 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.98■□□□□ 0.95
PCDHB8Q9UN66 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.98■□□□□ 0.95
PCDHB8Q9UN66 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDHB8Q9UN66 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDHB8Q9UN66 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDHB8Q9UN66 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.98■□□□□ 0.95
PCDHB8Q9UN66 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDHB8Q9UN66 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB8Q9UN66 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PCDHB8Q9UN66 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDHB8Q9UN66 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB8Q9UN66 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB8Q9UN66 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB8Q9UN66 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB8Q9UN66 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDHB8Q9UN66 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB8Q9UN66 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB8Q9UN66 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB8Q9UN66 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB8Q9UN66 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB8Q9UN66 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC20.97■□□□□ 0.95
PCDHB8Q9UN66 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.97■□□□□ 0.95
PCDHB8Q9UN66 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDHB8Q9UN66 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.97■□□□□ 0.95
PCDHB8Q9UN66 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.97■□□□□ 0.95
PCDHB8Q9UN66 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDHB8Q9UN66 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB8Q9UN66 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PCDHB8Q9UN66 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB8Q9UN66 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PCDHB8Q9UN66 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB8Q9UN66 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB8Q9UN66 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB8Q9UN66 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
PCDHB8Q9UN66 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB8Q9UN66 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB8Q9UN66 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB8Q9UN66 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHB8Q9UN66 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB8Q9UN66 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB8Q9UN66 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
PCDHB8Q9UN66 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB8Q9UN66 ECEL1P3-201ENST00000427961 737 ntBASIC20.96■□□□□ 0.95
PCDHB8Q9UN66 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.96■□□□□ 0.95
PCDHB8Q9UN66 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.96■□□□□ 0.95
PCDHB8Q9UN66 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB8Q9UN66 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHB8Q9UN66 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.96■□□□□ 0.95
PCDHB8Q9UN66 REXO1L10P-201ENST00000615707 1290 ntBASIC20.96■□□□□ 0.95
PCDHB8Q9UN66 AL445675.2-201ENST00000620291 557 ntBASIC20.96■□□□□ 0.95
PCDHB8Q9UN66 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PCDHB8Q9UN66 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB8Q9UN66 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB8Q9UN66 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.95■□□□□ 0.95
PCDHB8Q9UN66 AL512408.1-201ENST00000569378 2000 ntBASIC20.95■□□□□ 0.94
PCDHB8Q9UN66 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB8Q9UN66 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB8Q9UN66 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDHB8Q9UN66 AP001271.2-201ENST00000624018 1556 ntBASIC20.95■□□□□ 0.94
PCDHB8Q9UN66 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB8Q9UN66 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.95■□□□□ 0.94
PCDHB8Q9UN66 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.95■□□□□ 0.94
PCDHB8Q9UN66 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB8Q9UN66 AC087499.1-201ENST00000418141 1075 ntBASIC20.95■□□□□ 0.94
PCDHB8Q9UN66 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.95■□□□□ 0.94
PCDHB8Q9UN66 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDHB8Q9UN66 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB8Q9UN66 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDHB8Q9UN66 FEM1AP1-201ENST00000431297 1995 ntBASIC20.95■□□□□ 0.94
PCDHB8Q9UN66 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB8Q9UN66 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB8Q9UN66 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDHB8Q9UN66 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.94■□□□□ 0.94
PCDHB8Q9UN66 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB8Q9UN66 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB8Q9UN66 GABARAPL3-202ENST00000624044 1851 ntBASIC20.94■□□□□ 0.94
PCDHB8Q9UN66 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB8Q9UN66 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHB8Q9UN66 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHB8Q9UN66 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB8Q9UN66 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB8Q9UN66 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB8Q9UN66 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB8Q9UN66 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.94■□□□□ 0.94
PCDHB8Q9UN66 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.94■□□□□ 0.94
PCDHB8Q9UN66 AC116562.2-201ENST00000507042 360 ntBASIC20.94■□□□□ 0.94
PCDHB8Q9UN66 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB8Q9UN66 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHB8Q9UN66 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB8Q9UN66 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB8Q9UN66 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.94■□□□□ 0.94
PCDHB8Q9UN66 LINC01023-201ENST00000606054 436 ntBASIC20.94■□□□□ 0.94
PCDHB8Q9UN66 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.94■□□□□ 0.94
PCDHB8Q9UN66 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB8Q9UN66 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHB8Q9UN66 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
PCDHB8Q9UN66 AL162377.1-201ENST00000618844 1793 ntBASIC20.94■□□□□ 0.94
PCDHB8Q9UN66 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB8Q9UN66 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB8Q9UN66 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms