Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.68■■□□□ 1.06
SPTLC3Q9NUV7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SPTLC3Q9NUV7 AC007322.3-201ENST00000426526 701 ntBASIC21.68■■□□□ 1.06
SPTLC3Q9NUV7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.68■■□□□ 1.06
SPTLC3Q9NUV7 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.68■■□□□ 1.06
SPTLC3Q9NUV7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.68■■□□□ 1.06
SPTLC3Q9NUV7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.68■■□□□ 1.06
SPTLC3Q9NUV7 TERF1P2-201ENST00000583350 1212 ntBASIC21.68■■□□□ 1.06
SPTLC3Q9NUV7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SPTLC3Q9NUV7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SPTLC3Q9NUV7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.68■■□□□ 1.06
SPTLC3Q9NUV7 AC004854.2-201ENST00000608450 1441 ntBASIC21.68■■□□□ 1.06
SPTLC3Q9NUV7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
SPTLC3Q9NUV7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.68■■□□□ 1.06
SPTLC3Q9NUV7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SPTLC3Q9NUV7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.68■■□□□ 1.06
SPTLC3Q9NUV7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SPTLC3Q9NUV7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SPTLC3Q9NUV7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.68■■□□□ 1.06
SPTLC3Q9NUV7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
SPTLC3Q9NUV7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.68■■□□□ 1.06
SPTLC3Q9NUV7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SPTLC3Q9NUV7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SPTLC3Q9NUV7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SPTLC3Q9NUV7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC21.67■■□□□ 1.06
SPTLC3Q9NUV7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SPTLC3Q9NUV7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.67■■□□□ 1.06
SPTLC3Q9NUV7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.67■■□□□ 1.06
SPTLC3Q9NUV7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPTLC3Q9NUV7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SPTLC3Q9NUV7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SPTLC3Q9NUV7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPTLC3Q9NUV7 AC009237.14-201ENST00000609975 1594 ntBASIC21.67■■□□□ 1.06
SPTLC3Q9NUV7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPTLC3Q9NUV7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPTLC3Q9NUV7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SPTLC3Q9NUV7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPTLC3Q9NUV7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPTLC3Q9NUV7 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.67■■□□□ 1.06
SPTLC3Q9NUV7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPTLC3Q9NUV7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.67■■□□□ 1.06
SPTLC3Q9NUV7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.67■■□□□ 1.06
SPTLC3Q9NUV7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.67■■□□□ 1.06
SPTLC3Q9NUV7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPTLC3Q9NUV7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.67■■□□□ 1.06
SPTLC3Q9NUV7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC21.67■■□□□ 1.06
SPTLC3Q9NUV7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPTLC3Q9NUV7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPTLC3Q9NUV7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
SPTLC3Q9NUV7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.67■■□□□ 1.06
SPTLC3Q9NUV7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.67■■□□□ 1.06
SPTLC3Q9NUV7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.66■■□□□ 1.06
SPTLC3Q9NUV7 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.66■■□□□ 1.06
SPTLC3Q9NUV7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPTLC3Q9NUV7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SPTLC3Q9NUV7 KRT18P20-201ENST00000548986 1279 ntBASIC21.66■■□□□ 1.06
SPTLC3Q9NUV7 AC243732.1-201ENST00000612648 864 ntBASIC21.66■■□□□ 1.06
SPTLC3Q9NUV7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPTLC3Q9NUV7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.66■■□□□ 1.06
SPTLC3Q9NUV7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPTLC3Q9NUV7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SPTLC3Q9NUV7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPTLC3Q9NUV7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPTLC3Q9NUV7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.65■■□□□ 1.06
SPTLC3Q9NUV7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPTLC3Q9NUV7 BICD1-207ENST00000551848 1962 ntBASIC21.65■■□□□ 1.06
SPTLC3Q9NUV7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPTLC3Q9NUV7 AL354751.1-201ENST00000412768 1863 ntBASIC21.65■■□□□ 1.06
SPTLC3Q9NUV7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPTLC3Q9NUV7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
SPTLC3Q9NUV7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPTLC3Q9NUV7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SPTLC3Q9NUV7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.65■■□□□ 1.06
SPTLC3Q9NUV7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
SPTLC3Q9NUV7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPTLC3Q9NUV7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPTLC3Q9NUV7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPTLC3Q9NUV7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPTLC3Q9NUV7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
SPTLC3Q9NUV7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SPTLC3Q9NUV7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SPTLC3Q9NUV7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
SPTLC3Q9NUV7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
SPTLC3Q9NUV7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPTLC3Q9NUV7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPTLC3Q9NUV7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPTLC3Q9NUV7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.64■■□□□ 1.06
SPTLC3Q9NUV7 AC068880.1-201ENST00000507289 2297 ntBASIC21.64■■□□□ 1.06
SPTLC3Q9NUV7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SPTLC3Q9NUV7 AC090164.3-201ENST00000610780 2143 ntBASIC21.64■■□□□ 1.06
SPTLC3Q9NUV7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.64■■□□□ 1.05
SPTLC3Q9NUV7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SPTLC3Q9NUV7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPTLC3Q9NUV7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPTLC3Q9NUV7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.64■■□□□ 1.05
SPTLC3Q9NUV7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SPTLC3Q9NUV7 AC123595.1-201ENST00000440769 1046 ntBASIC21.64■■□□□ 1.05
SPTLC3Q9NUV7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPTLC3Q9NUV7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.64■■□□□ 1.05
SPTLC3Q9NUV7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms