Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.52■□□□□ 0.56
KLHL1Q9NR64 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KLHL1Q9NR64 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.52■□□□□ 0.56
KLHL1Q9NR64 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KLHL1Q9NR64 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KLHL1Q9NR64 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
KLHL1Q9NR64 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KLHL1Q9NR64 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KLHL1Q9NR64 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KLHL1Q9NR64 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
KLHL1Q9NR64 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
KLHL1Q9NR64 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.52■□□□□ 0.56
KLHL1Q9NR64 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
KLHL1Q9NR64 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.52■□□□□ 0.56
KLHL1Q9NR64 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
KLHL1Q9NR64 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
KLHL1Q9NR64 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
KLHL1Q9NR64 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
KLHL1Q9NR64 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
KLHL1Q9NR64 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.52■□□□□ 0.55
KLHL1Q9NR64 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
KLHL1Q9NR64 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
KLHL1Q9NR64 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.51■□□□□ 0.55
KLHL1Q9NR64 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 AC120498.8-201ENST00000614275 531 ntBASIC18.51■□□□□ 0.55
KLHL1Q9NR64 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KLHL1Q9NR64 AC020907.5-201ENST00000624372 1936 ntBASIC18.51■□□□□ 0.55
KLHL1Q9NR64 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KLHL1Q9NR64 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KLHL1Q9NR64 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.5■□□□□ 0.55
KLHL1Q9NR64 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KLHL1Q9NR64 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.5■□□□□ 0.55
KLHL1Q9NR64 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KLHL1Q9NR64 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KLHL1Q9NR64 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KLHL1Q9NR64 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KLHL1Q9NR64 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KLHL1Q9NR64 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
KLHL1Q9NR64 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KLHL1Q9NR64 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
KLHL1Q9NR64 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.5■□□□□ 0.55
KLHL1Q9NR64 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.5■□□□□ 0.55
KLHL1Q9NR64 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
KLHL1Q9NR64 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
KLHL1Q9NR64 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
KLHL1Q9NR64 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KLHL1Q9NR64 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.5■□□□□ 0.55
KLHL1Q9NR64 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KLHL1Q9NR64 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KLHL1Q9NR64 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.5■□□□□ 0.55
KLHL1Q9NR64 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KLHL1Q9NR64 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.5■□□□□ 0.55
KLHL1Q9NR64 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
KLHL1Q9NR64 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KLHL1Q9NR64 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
KLHL1Q9NR64 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KLHL1Q9NR64 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KLHL1Q9NR64 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
KLHL1Q9NR64 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
KLHL1Q9NR64 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
KLHL1Q9NR64 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.49■□□□□ 0.55
KLHL1Q9NR64 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KLHL1Q9NR64 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
KLHL1Q9NR64 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KLHL1Q9NR64 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.49■□□□□ 0.55
KLHL1Q9NR64 AL023875.1-201ENST00000640777 796 ntBASIC18.49■□□□□ 0.55
KLHL1Q9NR64 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KLHL1Q9NR64 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms