Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMG20AQ9NP66 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMG20AQ9NP66 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMG20AQ9NP66 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMG20AQ9NP66 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
HMG20AQ9NP66 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMG20AQ9NP66 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMG20AQ9NP66 MIR572-201ENST00000384983 95 ntBASIC17.88■□□□□ 0.45
HMG20AQ9NP66 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMG20AQ9NP66 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.88■□□□□ 0.45
HMG20AQ9NP66 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.88■□□□□ 0.45
HMG20AQ9NP66 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMG20AQ9NP66 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMG20AQ9NP66 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.88■□□□□ 0.45
HMG20AQ9NP66 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMG20AQ9NP66 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMG20AQ9NP66 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMG20AQ9NP66 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20AQ9NP66 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20AQ9NP66 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.87■□□□□ 0.45
HMG20AQ9NP66 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20AQ9NP66 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20AQ9NP66 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20AQ9NP66 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20AQ9NP66 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20AQ9NP66 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.87■□□□□ 0.45
HMG20AQ9NP66 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20AQ9NP66 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.87■□□□□ 0.45
HMG20AQ9NP66 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HMG20AQ9NP66 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
HMG20AQ9NP66 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HMG20AQ9NP66 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
HMG20AQ9NP66 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.87■□□□□ 0.45
HMG20AQ9NP66 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20AQ9NP66 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.87■□□□□ 0.45
HMG20AQ9NP66 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.87■□□□□ 0.45
HMG20AQ9NP66 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20AQ9NP66 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.87■□□□□ 0.45
HMG20AQ9NP66 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20AQ9NP66 BX005040.4-201ENST00000637145 1518 ntBASIC17.87■□□□□ 0.45
HMG20AQ9NP66 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20AQ9NP66 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
HMG20AQ9NP66 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20AQ9NP66 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20AQ9NP66 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.86■□□□□ 0.45
HMG20AQ9NP66 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20AQ9NP66 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.86■□□□□ 0.45
HMG20AQ9NP66 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.86■□□□□ 0.45
HMG20AQ9NP66 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20AQ9NP66 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.86■□□□□ 0.45
HMG20AQ9NP66 AC011484.1-201ENST00000377652 1995 ntBASIC17.86■□□□□ 0.45
HMG20AQ9NP66 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20AQ9NP66 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20AQ9NP66 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20AQ9NP66 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.86■□□□□ 0.45
HMG20AQ9NP66 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20AQ9NP66 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
HMG20AQ9NP66 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.86■□□□□ 0.45
HMG20AQ9NP66 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.86■□□□□ 0.45
HMG20AQ9NP66 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.86■□□□□ 0.45
HMG20AQ9NP66 AL139246.5-201ENST00000606645 996 ntBASIC17.86■□□□□ 0.45
HMG20AQ9NP66 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
HMG20AQ9NP66 AC104581.1-202ENST00000635932 2618 ntBASIC17.86■□□□□ 0.45
HMG20AQ9NP66 AC055733.4-201ENST00000638462 1354 ntBASIC17.86■□□□□ 0.45
HMG20AQ9NP66 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
HMG20AQ9NP66 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20AQ9NP66 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.86■□□□□ 0.45
HMG20AQ9NP66 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20AQ9NP66 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20AQ9NP66 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20AQ9NP66 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20AQ9NP66 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.86■□□□□ 0.45
HMG20AQ9NP66 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
HMG20AQ9NP66 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20AQ9NP66 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20AQ9NP66 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20AQ9NP66 AC009113.1-201ENST00000570267 2443 ntBASIC17.86■□□□□ 0.45
HMG20AQ9NP66 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20AQ9NP66 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
HMG20AQ9NP66 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20AQ9NP66 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
HMG20AQ9NP66 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
HMG20AQ9NP66 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20AQ9NP66 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20AQ9NP66 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20AQ9NP66 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20AQ9NP66 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20AQ9NP66 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
HMG20AQ9NP66 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.85■□□□□ 0.45
HMG20AQ9NP66 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20AQ9NP66 SUDS3P1-201ENST00000505831 966 ntBASIC17.85■□□□□ 0.45
HMG20AQ9NP66 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.85■□□□□ 0.45
HMG20AQ9NP66 AC005224.4-201ENST00000583262 1652 ntBASIC17.85■□□□□ 0.45
HMG20AQ9NP66 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20AQ9NP66 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.85■□□□□ 0.45
HMG20AQ9NP66 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
HMG20AQ9NP66 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.85■□□□□ 0.45
HMG20AQ9NP66 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20AQ9NP66 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20AQ9NP66 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms