Protein–RNA interactions for Protein: Q9HD34

LYRM4, LYR motif-containing protein 4, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4Q9HD34 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYRM4Q9HD34 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
LYRM4Q9HD34 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYRM4Q9HD34 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.57■□□□□ 0.56
LYRM4Q9HD34 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.57■□□□□ 0.56
LYRM4Q9HD34 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.57■□□□□ 0.56
LYRM4Q9HD34 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.57■□□□□ 0.56
LYRM4Q9HD34 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYRM4Q9HD34 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LYRM4Q9HD34 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.57■□□□□ 0.56
LYRM4Q9HD34 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
LYRM4Q9HD34 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LYRM4Q9HD34 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYRM4Q9HD34 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYRM4Q9HD34 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYRM4Q9HD34 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.57■□□□□ 0.56
LYRM4Q9HD34 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYRM4Q9HD34 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
LYRM4Q9HD34 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYRM4Q9HD34 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYRM4Q9HD34 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYRM4Q9HD34 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYRM4Q9HD34 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
LYRM4Q9HD34 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYRM4Q9HD34 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYRM4Q9HD34 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYRM4Q9HD34 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.56■□□□□ 0.56
LYRM4Q9HD34 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LYRM4Q9HD34 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.56■□□□□ 0.56
LYRM4Q9HD34 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.56■□□□□ 0.56
LYRM4Q9HD34 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.56■□□□□ 0.56
LYRM4Q9HD34 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYRM4Q9HD34 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
LYRM4Q9HD34 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYRM4Q9HD34 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LYRM4Q9HD34 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYRM4Q9HD34 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LYRM4Q9HD34 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYRM4Q9HD34 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYRM4Q9HD34 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
LYRM4Q9HD34 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
LYRM4Q9HD34 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LYRM4Q9HD34 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.55■□□□□ 0.56
LYRM4Q9HD34 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.55■□□□□ 0.56
LYRM4Q9HD34 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYRM4Q9HD34 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
LYRM4Q9HD34 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYRM4Q9HD34 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYRM4Q9HD34 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LYRM4Q9HD34 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LYRM4Q9HD34 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYRM4Q9HD34 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYRM4Q9HD34 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.55■□□□□ 0.56
LYRM4Q9HD34 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.55■□□□□ 0.56
LYRM4Q9HD34 PCDHAC2-203ENST00000615316 3011 ntBASIC18.55■□□□□ 0.56
LYRM4Q9HD34 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYRM4Q9HD34 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYRM4Q9HD34 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LYRM4Q9HD34 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
LYRM4Q9HD34 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.55■□□□□ 0.56
LYRM4Q9HD34 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYRM4Q9HD34 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.55■□□□□ 0.56
LYRM4Q9HD34 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.55■□□□□ 0.56
LYRM4Q9HD34 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYRM4Q9HD34 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.55■□□□□ 0.56
LYRM4Q9HD34 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.54■□□□□ 0.56
LYRM4Q9HD34 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYRM4Q9HD34 NBPF21P-201ENST00000425093 1451 ntBASIC18.54■□□□□ 0.56
LYRM4Q9HD34 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYRM4Q9HD34 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
LYRM4Q9HD34 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYRM4Q9HD34 KRT18P29-201ENST00000397031 1267 ntBASIC18.54■□□□□ 0.56
LYRM4Q9HD34 AC239809.2-201ENST00000415381 517 ntBASIC18.54■□□□□ 0.56
LYRM4Q9HD34 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LYRM4Q9HD34 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.54■□□□□ 0.56
LYRM4Q9HD34 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.54■□□□□ 0.56
LYRM4Q9HD34 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.54■□□□□ 0.56
LYRM4Q9HD34 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LYRM4Q9HD34 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LYRM4Q9HD34 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.54■□□□□ 0.56
LYRM4Q9HD34 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LYRM4Q9HD34 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYRM4Q9HD34 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LYRM4Q9HD34 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
LYRM4Q9HD34 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYRM4Q9HD34 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
LYRM4Q9HD34 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYRM4Q9HD34 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LYRM4Q9HD34 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LYRM4Q9HD34 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.54■□□□□ 0.56
LYRM4Q9HD34 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYRM4Q9HD34 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.53■□□□□ 0.56
LYRM4Q9HD34 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
LYRM4Q9HD34 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
LYRM4Q9HD34 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.53■□□□□ 0.56
LYRM4Q9HD34 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LYRM4Q9HD34 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LYRM4Q9HD34 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LYRM4Q9HD34 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LYRM4Q9HD34 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms