Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.46■□□□□ 0.55
CHD8Q9HCK8 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
CHD8Q9HCK8 NUS1P1-201ENST00000446295 882 ntBASIC18.46■□□□□ 0.55
CHD8Q9HCK8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.46■□□□□ 0.55
CHD8Q9HCK8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHD8Q9HCK8 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
CHD8Q9HCK8 AC011498.5-201ENST00000592027 486 ntBASIC18.46■□□□□ 0.55
CHD8Q9HCK8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHD8Q9HCK8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHD8Q9HCK8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CHD8Q9HCK8 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CHD8Q9HCK8 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD8Q9HCK8 HLA-G-203ENST00000376818 1127 ntBASIC18.45■□□□□ 0.54
CHD8Q9HCK8 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHD8Q9HCK8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.45■□□□□ 0.54
CHD8Q9HCK8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.45■□□□□ 0.54
CHD8Q9HCK8 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.45■□□□□ 0.54
CHD8Q9HCK8 AC131212.4-201ENST00000623606 975 ntBASIC18.45■□□□□ 0.54
CHD8Q9HCK8 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CHD8Q9HCK8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHD8Q9HCK8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHD8Q9HCK8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHD8Q9HCK8 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CHD8Q9HCK8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CHD8Q9HCK8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.45■□□□□ 0.54
CHD8Q9HCK8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD8Q9HCK8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD8Q9HCK8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CHD8Q9HCK8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.45■□□□□ 0.54
CHD8Q9HCK8 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CHD8Q9HCK8 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
CHD8Q9HCK8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD8Q9HCK8 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.45■□□□□ 0.54
CHD8Q9HCK8 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.45■□□□□ 0.54
CHD8Q9HCK8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD8Q9HCK8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.45■□□□□ 0.54
CHD8Q9HCK8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.45■□□□□ 0.54
CHD8Q9HCK8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD8Q9HCK8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD8Q9HCK8 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.45■□□□□ 0.54
CHD8Q9HCK8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD8Q9HCK8 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD8Q9HCK8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHD8Q9HCK8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD8Q9HCK8 HLA-J-202ENST00000469281 1241 ntBASIC18.44■□□□□ 0.54
CHD8Q9HCK8 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.44■□□□□ 0.54
CHD8Q9HCK8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.44■□□□□ 0.54
CHD8Q9HCK8 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.44■□□□□ 0.54
CHD8Q9HCK8 AC012615.1-201ENST00000565797 1299 ntBASIC18.44■□□□□ 0.54
CHD8Q9HCK8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD8Q9HCK8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHD8Q9HCK8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD8Q9HCK8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CHD8Q9HCK8 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD8Q9HCK8 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.44■□□□□ 0.54
CHD8Q9HCK8 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.44■□□□□ 0.54
CHD8Q9HCK8 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.44■□□□□ 0.54
CHD8Q9HCK8 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHD8Q9HCK8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
CHD8Q9HCK8 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD8Q9HCK8 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHD8Q9HCK8 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CHD8Q9HCK8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.44■□□□□ 0.54
CHD8Q9HCK8 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
CHD8Q9HCK8 AP001160.2-201ENST00000596071 487 ntBASIC18.44■□□□□ 0.54
CHD8Q9HCK8 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CHD8Q9HCK8 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CHD8Q9HCK8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD8Q9HCK8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.44■□□□□ 0.54
CHD8Q9HCK8 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHD8Q9HCK8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.43■□□□□ 0.54
CHD8Q9HCK8 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.43■□□□□ 0.54
CHD8Q9HCK8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.43■□□□□ 0.54
CHD8Q9HCK8 AC092597.1-201ENST00000487352 616 ntBASIC18.43■□□□□ 0.54
CHD8Q9HCK8 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.43■□□□□ 0.54
CHD8Q9HCK8 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.43■□□□□ 0.54
CHD8Q9HCK8 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHD8Q9HCK8 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.43■□□□□ 0.54
CHD8Q9HCK8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.43■□□□□ 0.54
CHD8Q9HCK8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHD8Q9HCK8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CHD8Q9HCK8 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
CHD8Q9HCK8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHD8Q9HCK8 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.43■□□□□ 0.54
CHD8Q9HCK8 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHD8Q9HCK8 CHCHD2P8-201ENST00000429873 447 ntBASIC18.43■□□□□ 0.54
CHD8Q9HCK8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.43■□□□□ 0.54
CHD8Q9HCK8 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CHD8Q9HCK8 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.43■□□□□ 0.54
CHD8Q9HCK8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CHD8Q9HCK8 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHD8Q9HCK8 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHD8Q9HCK8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHD8Q9HCK8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.42■□□□□ 0.54
CHD8Q9HCK8 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.42■□□□□ 0.54
CHD8Q9HCK8 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.42■□□□□ 0.54
CHD8Q9HCK8 AL121912.1-201ENST00000603683 238 ntBASIC18.42■□□□□ 0.54
CHD8Q9HCK8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHD8Q9HCK8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHD8Q9HCK8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms