Protein–RNA interactions for Protein: Q9H9D4

ZNF408, Zinc finger protein 408, humanhuman

Predictions only

Length 720 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408Q9H9D4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ZNF408Q9H9D4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZNF408Q9H9D4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ZNF408Q9H9D4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC23.26■■□□□ 1.31
ZNF408Q9H9D4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.26■■□□□ 1.31
ZNF408Q9H9D4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZNF408Q9H9D4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ZNF408Q9H9D4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZNF408Q9H9D4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC23.25■■□□□ 1.31
ZNF408Q9H9D4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZNF408Q9H9D4 AC242852.2-201ENST00000615738 1807 ntBASIC23.25■■□□□ 1.31
ZNF408Q9H9D4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZNF408Q9H9D4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZNF408Q9H9D4 FXN-203ENST00000396366 922 ntTSL 2 BASIC23.25■■□□□ 1.31
ZNF408Q9H9D4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
ZNF408Q9H9D4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC23.25■■□□□ 1.31
ZNF408Q9H9D4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC23.25■■□□□ 1.31
ZNF408Q9H9D4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZNF408Q9H9D4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZNF408Q9H9D4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.25■■□□□ 1.31
ZNF408Q9H9D4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZNF408Q9H9D4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZNF408Q9H9D4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
ZNF408Q9H9D4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC23.24■■□□□ 1.31
ZNF408Q9H9D4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ZNF408Q9H9D4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
ZNF408Q9H9D4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC23.24■■□□□ 1.31
ZNF408Q9H9D4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC23.24■■□□□ 1.31
ZNF408Q9H9D4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC23.24■■□□□ 1.31
ZNF408Q9H9D4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.24■■□□□ 1.31
ZNF408Q9H9D4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC23.24■■□□□ 1.31
ZNF408Q9H9D4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ZNF408Q9H9D4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 AC116351.2-201ENST00000606540 1585 ntBASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 PRSS44-201ENST00000515154 1146 ntBASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 TFP1-202ENST00000475455 1573 ntBASIC23.23■■□□□ 1.31
ZNF408Q9H9D4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.22■■□□□ 1.31
ZNF408Q9H9D4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZNF408Q9H9D4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC23.22■■□□□ 1.31
ZNF408Q9H9D4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZNF408Q9H9D4 TSPY17P-201ENST00000450329 467 ntBASIC23.22■■□□□ 1.31
ZNF408Q9H9D4 GXYLT1P6-201ENST00000456472 1187 ntBASIC23.22■■□□□ 1.31
ZNF408Q9H9D4 AL512604.3-201ENST00000569583 964 ntBASIC23.22■■□□□ 1.31
ZNF408Q9H9D4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC23.22■■□□□ 1.31
ZNF408Q9H9D4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC23.22■■□□□ 1.31
ZNF408Q9H9D4 HLA-A-209ENST00000638375 975 ntBASIC23.22■■□□□ 1.31
ZNF408Q9H9D4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZNF408Q9H9D4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ZNF408Q9H9D4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC23.22■■□□□ 1.31
ZNF408Q9H9D4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZNF408Q9H9D4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ZNF408Q9H9D4 GOLGA6L3-201ENST00000507199 1679 ntBASIC23.22■■□□□ 1.31
ZNF408Q9H9D4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZNF408Q9H9D4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.22■■□□□ 1.31
ZNF408Q9H9D4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZNF408Q9H9D4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZNF408Q9H9D4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZNF408Q9H9D4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC23.21■■□□□ 1.31
ZNF408Q9H9D4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC23.21■■□□□ 1.31
ZNF408Q9H9D4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC23.21■■□□□ 1.31
ZNF408Q9H9D4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC23.21■■□□□ 1.31
ZNF408Q9H9D4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC23.21■■□□□ 1.31
ZNF408Q9H9D4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.21■■□□□ 1.31
ZNF408Q9H9D4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZNF408Q9H9D4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZNF408Q9H9D4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
ZNF408Q9H9D4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.2■■□□□ 1.3
ZNF408Q9H9D4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZNF408Q9H9D4 AC018553.1-201ENST00000616682 1458 ntBASIC23.2■■□□□ 1.3
ZNF408Q9H9D4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ZNF408Q9H9D4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZNF408Q9H9D4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZNF408Q9H9D4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms