Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 AC024257.2-201ENST00000549699 147 ntBASIC21.51■■□□□ 1.03
KCNF1Q9H3M0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KCNF1Q9H3M0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
KCNF1Q9H3M0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.51■■□□□ 1.03
KCNF1Q9H3M0 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KCNF1Q9H3M0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KCNF1Q9H3M0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
KCNF1Q9H3M0 TEX21P-204ENST00000641479 1693 ntBASIC21.5■■□□□ 1.03
KCNF1Q9H3M0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KCNF1Q9H3M0 AP001271.2-201ENST00000624018 1556 ntBASIC21.5■■□□□ 1.03
KCNF1Q9H3M0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.5■■□□□ 1.03
KCNF1Q9H3M0 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KCNF1Q9H3M0 AC120498.10-201ENST00000621827 505 ntBASIC21.5■■□□□ 1.03
KCNF1Q9H3M0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KCNF1Q9H3M0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
KCNF1Q9H3M0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC21.5■■□□□ 1.03
KCNF1Q9H3M0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
KCNF1Q9H3M0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KCNF1Q9H3M0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
KCNF1Q9H3M0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
KCNF1Q9H3M0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
KCNF1Q9H3M0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KCNF1Q9H3M0 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KCNF1Q9H3M0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
KCNF1Q9H3M0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNF1Q9H3M0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
KCNF1Q9H3M0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.49■■□□□ 1.03
KCNF1Q9H3M0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNF1Q9H3M0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KCNF1Q9H3M0 UNC93B3-201ENST00000308076 687 ntBASIC21.49■■□□□ 1.03
KCNF1Q9H3M0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNF1Q9H3M0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNF1Q9H3M0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
KCNF1Q9H3M0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNF1Q9H3M0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNF1Q9H3M0 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.49■■□□□ 1.03
KCNF1Q9H3M0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KCNF1Q9H3M0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.49■■□□□ 1.03
KCNF1Q9H3M0 AC012414.1-201ENST00000556676 535 ntBASIC21.49■■□□□ 1.03
KCNF1Q9H3M0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.49■■□□□ 1.03
KCNF1Q9H3M0 AL035685.1-201ENST00000636663 812 ntBASIC21.49■■□□□ 1.03
KCNF1Q9H3M0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNF1Q9H3M0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNF1Q9H3M0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNF1Q9H3M0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
KCNF1Q9H3M0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNF1Q9H3M0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KCNF1Q9H3M0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
KCNF1Q9H3M0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNF1Q9H3M0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNF1Q9H3M0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KCNF1Q9H3M0 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.48■■□□□ 1.03
KCNF1Q9H3M0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KCNF1Q9H3M0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KCNF1Q9H3M0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KCNF1Q9H3M0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KCNF1Q9H3M0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KCNF1Q9H3M0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
KCNF1Q9H3M0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KCNF1Q9H3M0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.48■■□□□ 1.03
KCNF1Q9H3M0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.48■■□□□ 1.03
KCNF1Q9H3M0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KCNF1Q9H3M0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.48■■□□□ 1.03
KCNF1Q9H3M0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.48■■□□□ 1.03
KCNF1Q9H3M0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.48■■□□□ 1.03
KCNF1Q9H3M0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KCNF1Q9H3M0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
KCNF1Q9H3M0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KCNF1Q9H3M0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.47■■□□□ 1.03
KCNF1Q9H3M0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.47■■□□□ 1.03
KCNF1Q9H3M0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KCNF1Q9H3M0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.47■■□□□ 1.03
KCNF1Q9H3M0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KCNF1Q9H3M0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KCNF1Q9H3M0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
KCNF1Q9H3M0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
KCNF1Q9H3M0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KCNF1Q9H3M0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KCNF1Q9H3M0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.47■■□□□ 1.03
KCNF1Q9H3M0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
KCNF1Q9H3M0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.47■■□□□ 1.03
KCNF1Q9H3M0 AC067852.2-201ENST00000590513 2313 ntBASIC21.47■■□□□ 1.03
KCNF1Q9H3M0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.47■■□□□ 1.03
KCNF1Q9H3M0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.47■■□□□ 1.03
KCNF1Q9H3M0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
KCNF1Q9H3M0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
KCNF1Q9H3M0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KCNF1Q9H3M0 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
KCNF1Q9H3M0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
KCNF1Q9H3M0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KCNF1Q9H3M0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KCNF1Q9H3M0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KCNF1Q9H3M0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.46■■□□□ 1.03
KCNF1Q9H3M0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.46■■□□□ 1.03
KCNF1Q9H3M0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
KCNF1Q9H3M0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
KCNF1Q9H3M0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KCNF1Q9H3M0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.46■■□□□ 1.03
KCNF1Q9H3M0 AC079140.4-201ENST00000507448 529 ntBASIC21.46■■□□□ 1.03
KCNF1Q9H3M0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms