Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.264e-6■■■■□ 19.7
CSTF2TQ9H0L4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.45■■□□□ 1.184e-6■■■■□ 19.7
CSTF2TQ9H0L4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.176e-7■■■■□ 19.7
CSTF2TQ9H0L4 PRR5-209ENST00000457960 881 ntTSL 522.07■■□□□ 1.127e-7■■■■□ 19.7
CSTF2TQ9H0L4 EMC10-208ENST00000601780 2178 ntTSL 1 (best)21.43■■□□□ 1.024e-6■■■■□ 19.7
CSTF2TQ9H0L4 BCAP31-206ENST00000442093 793 ntTSL 220.82■□□□□ 0.924e-6■■■■□ 19.7
CSTF2TQ9H0L4 WDR4-206ENST00000479429 759 ntTSL 520.63■□□□□ 0.893e-6■■■■□ 19.7
CSTF2TQ9H0L4 SEPT9-218ENST00000587514 540 ntTSL 520.62■□□□□ 0.894e-7■■■■□ 19.7
CSTF2TQ9H0L4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.6■□□□□ 0.734e-6■■■■□ 19.7
CSTF2TQ9H0L4 WDR4-204ENST00000470658 901 ntTSL 519.33■□□□□ 0.683e-6■■■■□ 19.7
CSTF2TQ9H0L4 SEPT9-227ENST00000590059 670 ntTSL 519.32■□□□□ 0.682e-7■■■■□ 19.7
CSTF2TQ9H0L4 SEPT9-230ENST00000590586 572 ntTSL 419.13■□□□□ 0.654e-7■■■■□ 19.7
CSTF2TQ9H0L4 BCAP31-204ENST00000429550 684 ntTSL 318.78■□□□□ 0.64e-6■■■■□ 19.7
CSTF2TQ9H0L4 MAZ-207ENST00000563012 646 ntTSL 318.73■□□□□ 0.594e-6■■■■□ 19.7
CSTF2TQ9H0L4 PRR5-212ENST00000477331 1041 ntTSL 218.72■□□□□ 0.597e-7■■■■□ 19.7
CSTF2TQ9H0L4 WDR4-207ENST00000492742 2205 ntTSL 218.31■□□□□ 0.523e-6■■■■□ 19.7
CSTF2TQ9H0L4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.493e-6■■■■□ 19.7
CSTF2TQ9H0L4 AP1G1-210ENST00000565412 619 ntTSL 317.51■□□□□ 0.394e-6■■■■□ 19.7
CSTF2TQ9H0L4 BCAP31-202ENST00000416815 688 ntTSL 517.5■□□□□ 0.394e-6■■■■□ 19.7
CSTF2TQ9H0L4 AP1G1-205ENST00000563104 882 ntTSL 417.42■□□□□ 0.384e-6■■■■□ 19.7
CSTF2TQ9H0L4 AP1G1-214ENST00000567583 606 ntTSL 217.41■□□□□ 0.384e-6■■■■□ 19.7
CSTF2TQ9H0L4 TGIF2-206ENST00000560025 923 ntTSL 317.25■□□□□ 0.354e-7■■■■□ 19.7
CSTF2TQ9H0L4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17■□□□□ 0.311e-6■■■■□ 19.7
CSTF2TQ9H0L4 PRR5-208ENST00000455389 1431 ntTSL 316.97■□□□□ 0.314e-7■■■■□ 19.7
CSTF2TQ9H0L4 PRR5-206ENST00000432186 905 ntTSL 216.94■□□□□ 0.31e-6■■■■□ 19.7
CSTF2TQ9H0L4 AP1G1-215ENST00000568327 1724 ntTSL 516.82■□□□□ 0.284e-6■■■■□ 19.7
CSTF2TQ9H0L4 SLC19A1-208ENST00000468508 1435 ntTSL 216.61■□□□□ 0.252e-6■■■■□ 19.7
CSTF2TQ9H0L4 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.08■□□□□ 0.161e-6■■■■□ 19.7
CSTF2TQ9H0L4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.03■□□□□ 0.161e-6■■■■□ 19.7
CSTF2TQ9H0L4 USP20-208ENST00000494971 503 ntTSL 315.97■□□□□ 0.154e-6■■■■□ 19.7
CSTF2TQ9H0L4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.112e-7■■■■□ 19.7
CSTF2TQ9H0L4 AP1G1-206ENST00000563259 844 ntTSL 415.72■□□□□ 0.114e-6■■■■□ 19.7
CSTF2TQ9H0L4 PRR5-207ENST00000432916 1430 ntTSL 215.48■□□□□ 0.076e-7■■■■□ 19.7
CSTF2TQ9H0L4 USP20-206ENST00000491053 590 ntTSL 515.3■□□□□ 0.044e-6■■■■□ 19.7
CSTF2TQ9H0L4 TMCO3-203ENST00000460039 864 ntTSL 315.07■□□□□ 09e-7■■■■□ 19.7
CSTF2TQ9H0L4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.74□□□□□ -0.051e-6■■■■□ 19.7
CSTF2TQ9H0L4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.054e-7■■■■□ 19.7
CSTF2TQ9H0L4 BCAP31-203ENST00000423827 669 ntTSL 514.54□□□□□ -0.084e-6■■■■□ 19.7
CSTF2TQ9H0L4 PRR5-215ENST00000495017 2125 ntTSL 1 (best)14.5□□□□□ -0.094e-7■■■■□ 19.7
CSTF2TQ9H0L4 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.132e-7■■■■□ 19.7
CSTF2TQ9H0L4 TGIF2-204ENST00000558028 638 ntTSL 213.87□□□□□ -0.194e-7■■■■□ 19.7
CSTF2TQ9H0L4 WDR4-205ENST00000476326 1977 ntTSL 1 (best)13.77□□□□□ -0.213e-6■■■■□ 19.7
CSTF2TQ9H0L4 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.222e-7■■■■□ 19.7
CSTF2TQ9H0L4 PRR5-214ENST00000492475 920 ntTSL 513.34□□□□□ -0.271e-6■■■■□ 19.7
CSTF2TQ9H0L4 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.334e-6■■■■□ 19.7
CSTF2TQ9H0L4 MAZ-204ENST00000561855 672 ntTSL 512.97□□□□□ -0.334e-6■■■■□ 19.7
CSTF2TQ9H0L4 WDR4-203ENST00000463902 609 ntTSL 312.91□□□□□ -0.343e-6■■■■□ 19.7
CSTF2TQ9H0L4 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.361e-6■■■■□ 19.7
CSTF2TQ9H0L4 SLC19A1-206ENST00000460174 600 ntTSL 312.75□□□□□ -0.371e-6■■■■□ 19.7
CSTF2TQ9H0L4 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.394e-6■■■■□ 19.7
CSTF2TQ9H0L4 AP1G1-217ENST00000569185 559 ntTSL 312.58□□□□□ -0.44e-6■■■■□ 19.7
CSTF2TQ9H0L4 AP1G1-208ENST00000565009 2494 ntTSL 512.38□□□□□ -0.434e-6■■■■□ 19.7
CSTF2TQ9H0L4 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.444e-6■■■■□ 19.7
CSTF2TQ9H0L4 MAZ-206ENST00000562557 475 ntTSL 312.22□□□□□ -0.454e-6■■■■□ 19.7
CSTF2TQ9H0L4 RABL6-207ENST00000461992 763 ntTSL 1 (best)11.93□□□□□ -0.54e-6■■■■□ 19.7
CSTF2TQ9H0L4 AP1G1-218ENST00000569748 4554 ntAPPRIS P3 TSL 2 BASIC11.55□□□□□ -0.564e-6■■■■□ 19.7
CSTF2TQ9H0L4 SPESP1-202ENST00000560188 621 ntTSL 211.34□□□□□ -0.592e-6■■■■□ 19.7
CSTF2TQ9H0L4 KLHDC4-205ENST00000446344 4444 ntBASIC11.32□□□□□ -0.61e-7■■■■□ 19.7
CSTF2TQ9H0L4 USP20-203ENST00000372429 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.624e-6■■■■□ 19.7
CSTF2TQ9H0L4 AP1G1-212ENST00000566161 989 ntTSL 411.17□□□□□ -0.624e-6■■■■□ 19.7
CSTF2TQ9H0L4 AC131212.2-201ENST00000622917 1355 ntBASIC10.63□□□□□ -0.715e-8■■■■□ 19.7
CSTF2TQ9H0L4 TGIF2-208ENST00000611732 3344 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.914e-7■■■■□ 19.7
CSTF2TQ9H0L4 AP1G1-202ENST00000393512 3593 ntAPPRIS ALT1 TSL 5 BASIC8.75□□□□□ -1.014e-6■■■■□ 19.7
CSTF2TQ9H0L4 AP1G1-203ENST00000450149 1166 ntTSL 28.47□□□□□ -1.054e-6■■■■□ 19.7
CSTF2TQ9H0L4 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.134e-6■■■■□ 19.7
CSTF2TQ9H0L4 CD81-203ENST00000464784 794 ntTSL 520.9■□□□□ 0.941e-6■■■■□ 19.7
CSTF2TQ9H0L4 CD81-213ENST00000527343 720 ntTSL 316.76■□□□□ 0.271e-6■■■■□ 19.7
CSTF2TQ9H0L4 CARHSP1-206ENST00000563815 1913 ntTSL 217.45■□□□□ 0.385e-7■■■■□ 19.7
CSTF2TQ9H0L4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.295e-7■■■■□ 19.7
CSTF2TQ9H0L4 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.275e-7■■■■□ 19.7
CSTF2TQ9H0L4 CARHSP1-214ENST00000569572 578 ntTSL 313.23□□□□□ -0.295e-7■■■■□ 19.7
CSTF2TQ9H0L4 CARHSP1-207ENST00000565287 556 ntTSL 312.72□□□□□ -0.375e-7■■■■□ 19.7
CSTF2TQ9H0L4 SND1-209ENST00000470723 568 ntTSL 411.59□□□□□ -0.559e-8■■■■□ 19.7
CSTF2TQ9H0L4 SND1-201ENST00000354725 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.719e-8■■■■□ 19.7
CSTF2TQ9H0L4 SND1-213ENST00000486037 695 ntTSL 39.35□□□□□ -0.919e-8■■■■□ 19.7
CSTF2TQ9H0L4 SND1-211ENST00000484767 460 ntTSL 48.67□□□□□ -1.029e-8■■■■□ 19.7
CSTF2TQ9H0L4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.341e-6■■■■□ 19.7
CSTF2TQ9H0L4 CHD7-204ENST00000526846 500 ntTSL 214.93□□□□□ -0.024e-7■■■■□ 19.7
CSTF2TQ9H0L4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.491e-8■■■■□ 19.7
CSTF2TQ9H0L4 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.371e-8■■■■□ 19.7
CSTF2TQ9H0L4 PPARG-210ENST00000397029 686 ntTSL 312.07□□□□□ -0.481e-8■■■■□ 19.7
CSTF2TQ9H0L4 PPARG-207ENST00000397015 1722 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.111e-8■■■■□ 19.7
CSTF2TQ9H0L4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.271e-6■■■■□ 19.7
CSTF2TQ9H0L4 HOXA3-205ENST00000522456 503 ntTSL 420.39■□□□□ 0.851e-8■■■■□ 19.7
CSTF2TQ9H0L4 HOXA3-204ENST00000521401 598 ntTSL 320.21■□□□□ 0.831e-8■■■■□ 19.7
CSTF2TQ9H0L4 HOXA3-206ENST00000522788 581 ntTSL 320.21■□□□□ 0.831e-8■■■■□ 19.7
CSTF2TQ9H0L4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.081e-8■■■■□ 19.7
CSTF2TQ9H0L4 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.131e-8■■■■□ 19.7
CSTF2TQ9H0L4 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.31e-8■■■■□ 19.7
CSTF2TQ9H0L4 SS18L1-203ENST00000450482 781 ntTSL 511.02□□□□□ -0.651e-7■■■■□ 19.7
CSTF2TQ9H0L4 SS18L1-201ENST00000331758 4493 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -11e-7■■■■□ 19.7
CSTF2TQ9H0L4 FAM95C-204ENST00000637322 930 ntAPPRIS ALT2 TSL 515.54■□□□□ 0.084e-7■■■■□ 19.7
CSTF2TQ9H0L4 FAM95C-203ENST00000637288 1965 ntAPPRIS ALT2 TSL 513.23□□□□□ -0.294e-7■■■■□ 19.7
CSTF2TQ9H0L4 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC11.99□□□□□ -0.494e-7■■■■□ 19.7
CSTF2TQ9H0L4 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC11.61□□□□□ -0.554e-7■■■■□ 19.7
CSTF2TQ9H0L4 FAM95C-202ENST00000636756 654 ntTSL 27.09□□□□□ -1.274e-7■■■■□ 19.7
CSTF2TQ9H0L4 TMEM18-205ENST00000432667 2572 ntTSL 512.85□□□□□ -0.352e-9■■■■□ 19.7
CSTF2TQ9H0L4 TMEM18-201ENST00000281017 2762 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.512e-9■■■■□ 19.7
CSTF2TQ9H0L4 SIRT7-216ENST00000574915 315 ntTSL 222.09■■□□□ 1.135e-11■■■■□ 19.7
CSTF2TQ9H0L4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.15■□□□□ 0.669e-7■■■■□ 19.7
Retrieved 100 of 19,151 protein–RNA pairs in 188.7 ms