Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLIRPQ9GZT3 FP475955.4-201ENST00000623131 1990 ntBASIC17.35■□□□□ 0.37
SLIRPQ9GZT3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLIRPQ9GZT3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLIRPQ9GZT3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.35■□□□□ 0.37
SLIRPQ9GZT3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SLIRPQ9GZT3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLIRPQ9GZT3 AC092171.4-201ENST00000609130 632 ntBASIC17.35■□□□□ 0.37
SLIRPQ9GZT3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.35■□□□□ 0.37
SLIRPQ9GZT3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLIRPQ9GZT3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLIRPQ9GZT3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLIRPQ9GZT3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.35■□□□□ 0.37
SLIRPQ9GZT3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SLIRPQ9GZT3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLIRPQ9GZT3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLIRPQ9GZT3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.35■□□□□ 0.37
SLIRPQ9GZT3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SLIRPQ9GZT3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLIRPQ9GZT3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
SLIRPQ9GZT3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLIRPQ9GZT3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SLIRPQ9GZT3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLIRPQ9GZT3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLIRPQ9GZT3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.34■□□□□ 0.37
SLIRPQ9GZT3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLIRPQ9GZT3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SLIRPQ9GZT3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLIRPQ9GZT3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLIRPQ9GZT3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.34■□□□□ 0.37
SLIRPQ9GZT3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.34■□□□□ 0.37
SLIRPQ9GZT3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLIRPQ9GZT3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.34■□□□□ 0.37
SLIRPQ9GZT3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.34■□□□□ 0.37
SLIRPQ9GZT3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLIRPQ9GZT3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SLIRPQ9GZT3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SLIRPQ9GZT3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
SLIRPQ9GZT3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLIRPQ9GZT3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLIRPQ9GZT3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.34■□□□□ 0.37
SLIRPQ9GZT3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLIRPQ9GZT3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLIRPQ9GZT3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.33■□□□□ 0.37
SLIRPQ9GZT3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLIRPQ9GZT3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SLIRPQ9GZT3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLIRPQ9GZT3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLIRPQ9GZT3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SLIRPQ9GZT3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
SLIRPQ9GZT3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.33■□□□□ 0.37
SLIRPQ9GZT3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.33■□□□□ 0.37
SLIRPQ9GZT3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.33■□□□□ 0.37
SLIRPQ9GZT3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.33■□□□□ 0.37
SLIRPQ9GZT3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLIRPQ9GZT3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLIRPQ9GZT3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.33■□□□□ 0.36
SLIRPQ9GZT3 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.33■□□□□ 0.36
SLIRPQ9GZT3 AC245052.3-201ENST00000450182 901 ntBASIC17.33■□□□□ 0.36
SLIRPQ9GZT3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.33■□□□□ 0.36
SLIRPQ9GZT3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
SLIRPQ9GZT3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.33■□□□□ 0.36
SLIRPQ9GZT3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.33■□□□□ 0.36
SLIRPQ9GZT3 AC133561.4-201ENST00000566112 224 ntBASIC17.33■□□□□ 0.36
SLIRPQ9GZT3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLIRPQ9GZT3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLIRPQ9GZT3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
SLIRPQ9GZT3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.33■□□□□ 0.36
SLIRPQ9GZT3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SLIRPQ9GZT3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLIRPQ9GZT3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.33■□□□□ 0.36
SLIRPQ9GZT3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLIRPQ9GZT3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLIRPQ9GZT3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SLIRPQ9GZT3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLIRPQ9GZT3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.33■□□□□ 0.36
SLIRPQ9GZT3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLIRPQ9GZT3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.33■□□□□ 0.36
SLIRPQ9GZT3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLIRPQ9GZT3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLIRPQ9GZT3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLIRPQ9GZT3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLIRPQ9GZT3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLIRPQ9GZT3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLIRPQ9GZT3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SLIRPQ9GZT3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SLIRPQ9GZT3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLIRPQ9GZT3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLIRPQ9GZT3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SLIRPQ9GZT3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLIRPQ9GZT3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.32■□□□□ 0.36
SLIRPQ9GZT3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.32■□□□□ 0.36
SLIRPQ9GZT3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
SLIRPQ9GZT3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
SLIRPQ9GZT3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.32■□□□□ 0.36
SLIRPQ9GZT3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SLIRPQ9GZT3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.32■□□□□ 0.36
SLIRPQ9GZT3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLIRPQ9GZT3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLIRPQ9GZT3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms