Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.95■□□□□ 0.14
NKX6-2Q9C056 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX6-2Q9C056 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
NKX6-2Q9C056 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX6-2Q9C056 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NKX6-2Q9C056 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX6-2Q9C056 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX6-2Q9C056 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
NKX6-2Q9C056 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX6-2Q9C056 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX6-2Q9C056 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
NKX6-2Q9C056 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
NKX6-2Q9C056 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.95■□□□□ 0.14
NKX6-2Q9C056 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-2Q9C056 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-2Q9C056 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC15.94■□□□□ 0.14
NKX6-2Q9C056 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-2Q9C056 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-2Q9C056 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-2Q9C056 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
NKX6-2Q9C056 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.94■□□□□ 0.14
NKX6-2Q9C056 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-2Q9C056 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-2Q9C056 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-2Q9C056 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC15.94■□□□□ 0.14
NKX6-2Q9C056 RNF146-205ENST00000477776 762 ntTSL 3 BASIC15.94■□□□□ 0.14
NKX6-2Q9C056 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-2Q9C056 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC15.94■□□□□ 0.14
NKX6-2Q9C056 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC15.94■□□□□ 0.14
NKX6-2Q9C056 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-2Q9C056 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-2Q9C056 H19-201ENST00000411754 1788 ntTSL 5 BASIC15.94■□□□□ 0.14
NKX6-2Q9C056 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.94■□□□□ 0.14
NKX6-2Q9C056 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-2Q9C056 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-2Q9C056 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-2Q9C056 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-2Q9C056 AC067852.2-201ENST00000590513 2313 ntBASIC15.94■□□□□ 0.14
NKX6-2Q9C056 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-2Q9C056 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-2Q9C056 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-2Q9C056 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-2Q9C056 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-2Q9C056 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-2Q9C056 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX6-2Q9C056 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX6-2Q9C056 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.93■□□□□ 0.14
NKX6-2Q9C056 BICD1-207ENST00000551848 1962 ntBASIC15.93■□□□□ 0.14
NKX6-2Q9C056 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.93■□□□□ 0.14
NKX6-2Q9C056 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX6-2Q9C056 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX6-2Q9C056 AC092720.2-201ENST00000602388 1665 ntBASIC15.93■□□□□ 0.14
NKX6-2Q9C056 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX6-2Q9C056 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX6-2Q9C056 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC15.93■□□□□ 0.14
NKX6-2Q9C056 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX6-2Q9C056 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
NKX6-2Q9C056 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC15.93■□□□□ 0.14
NKX6-2Q9C056 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NKX6-2Q9C056 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
NKX6-2Q9C056 AC092171.4-201ENST00000609130 632 ntBASIC15.93■□□□□ 0.14
NKX6-2Q9C056 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
NKX6-2Q9C056 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX6-2Q9C056 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX6-2Q9C056 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.93■□□□□ 0.14
NKX6-2Q9C056 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.93■□□□□ 0.14
NKX6-2Q9C056 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.93■□□□□ 0.14
NKX6-2Q9C056 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NKX6-2Q9C056 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX6-2Q9C056 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX6-2Q9C056 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
NKX6-2Q9C056 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX6-2Q9C056 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-2Q9C056 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-2Q9C056 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.92■□□□□ 0.14
NKX6-2Q9C056 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.92■□□□□ 0.14
NKX6-2Q9C056 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-2Q9C056 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-2Q9C056 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.92■□□□□ 0.14
NKX6-2Q9C056 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
NKX6-2Q9C056 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-2Q9C056 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.92■□□□□ 0.14
NKX6-2Q9C056 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC15.92■□□□□ 0.14
NKX6-2Q9C056 PRTG-204ENST00000561292 833 ntTSL 3 BASIC15.92■□□□□ 0.14
NKX6-2Q9C056 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC15.92■□□□□ 0.14
NKX6-2Q9C056 MIR4787-201ENST00000607364 84 ntBASIC15.92■□□□□ 0.14
NKX6-2Q9C056 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC15.92■□□□□ 0.14
NKX6-2Q9C056 AC012354.3-201ENST00000623734 483 ntBASIC15.92■□□□□ 0.14
NKX6-2Q9C056 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-2Q9C056 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-2Q9C056 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.92■□□□□ 0.14
NKX6-2Q9C056 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-2Q9C056 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
NKX6-2Q9C056 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
NKX6-2Q9C056 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-2Q9C056 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-2Q9C056 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-2Q9C056 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-2Q9C056 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-2Q9C056 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms