Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 WWOX-218ENST00000627394 894 ntTSL 5 BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC11.72□□□□□ -0.53
LIMD2Q9BT23 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC11.71□□□□□ -0.53
LIMD2Q9BT23 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
LIMD2Q9BT23 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LIMD2Q9BT23 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LIMD2Q9BT23 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
LIMD2Q9BT23 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
LIMD2Q9BT23 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
LIMD2Q9BT23 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LIMD2Q9BT23 AC087633.2-202ENST00000565166 1439 ntBASIC11.71□□□□□ -0.53
LIMD2Q9BT23 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LIMD2Q9BT23 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC11.71□□□□□ -0.53
LIMD2Q9BT23 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LIMD2Q9BT23 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
LIMD2Q9BT23 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LIMD2Q9BT23 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LIMD2Q9BT23 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LIMD2Q9BT23 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LIMD2Q9BT23 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
LIMD2Q9BT23 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LIMD2Q9BT23 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
LIMD2Q9BT23 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC11.71□□□□□ -0.53
LIMD2Q9BT23 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC11.71□□□□□ -0.53
LIMD2Q9BT23 KRT18P5-201ENST00000436075 1291 ntBASIC11.71□□□□□ -0.53
LIMD2Q9BT23 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
LIMD2Q9BT23 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC11.71□□□□□ -0.53
LIMD2Q9BT23 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC11.71□□□□□ -0.53
LIMD2Q9BT23 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
LIMD2Q9BT23 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LIMD2Q9BT23 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
LIMD2Q9BT23 AC231657.2-201ENST00000624556 255 ntBASIC11.71□□□□□ -0.53
LIMD2Q9BT23 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
LIMD2Q9BT23 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC11.71□□□□□ -0.54
LIMD2Q9BT23 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LIMD2Q9BT23 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
LIMD2Q9BT23 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
LIMD2Q9BT23 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
LIMD2Q9BT23 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
LIMD2Q9BT23 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LIMD2Q9BT23 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
LIMD2Q9BT23 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LIMD2Q9BT23 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
LIMD2Q9BT23 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 AC005082.1-201ENST00000413042 2259 ntBASIC11.7□□□□□ -0.54
LIMD2Q9BT23 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 AL356652.1-201ENST00000615962 565 ntBASIC11.7□□□□□ -0.54
LIMD2Q9BT23 AC100791.3-201ENST00000617619 330 ntBASIC11.7□□□□□ -0.54
LIMD2Q9BT23 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 LINC01006-201ENST00000333319 2292 ntBASIC11.7□□□□□ -0.54
LIMD2Q9BT23 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms