Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VGLL1Q99990 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.92□□□□□ -0.02
VGLL1Q99990 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VGLL1Q99990 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VGLL1Q99990 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC14.91□□□□□ -0.02
VGLL1Q99990 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VGLL1Q99990 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VGLL1Q99990 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VGLL1Q99990 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VGLL1Q99990 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VGLL1Q99990 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC14.91□□□□□ -0.02
VGLL1Q99990 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VGLL1Q99990 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VGLL1Q99990 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VGLL1Q99990 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VGLL1Q99990 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.91□□□□□ -0.02
VGLL1Q99990 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VGLL1Q99990 PBX1-209ENST00000485769 834 ntTSL 2 BASIC14.91□□□□□ -0.02
VGLL1Q99990 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
VGLL1Q99990 NTF6G-201ENST00000591094 616 ntBASIC14.91□□□□□ -0.02
VGLL1Q99990 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC14.91□□□□□ -0.02
VGLL1Q99990 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VGLL1Q99990 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VGLL1Q99990 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VGLL1Q99990 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VGLL1Q99990 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VGLL1Q99990 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VGLL1Q99990 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VGLL1Q99990 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VGLL1Q99990 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VGLL1Q99990 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC14.91□□□□□ -0.02
VGLL1Q99990 Z82202.1-201ENST00000623446 1880 ntBASIC14.91□□□□□ -0.02
VGLL1Q99990 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC14.91□□□□□ -0.02
VGLL1Q99990 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VGLL1Q99990 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VGLL1Q99990 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.9□□□□□ -0.02
VGLL1Q99990 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
VGLL1Q99990 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VGLL1Q99990 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VGLL1Q99990 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VGLL1Q99990 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
VGLL1Q99990 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.9□□□□□ -0.02
VGLL1Q99990 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC14.9□□□□□ -0.02
VGLL1Q99990 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VGLL1Q99990 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VGLL1Q99990 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
VGLL1Q99990 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.9□□□□□ -0.02
VGLL1Q99990 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC14.9□□□□□ -0.02
VGLL1Q99990 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC14.9□□□□□ -0.02
VGLL1Q99990 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VGLL1Q99990 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.9□□□□□ -0.02
VGLL1Q99990 KRT16P6-202ENST00000425692 1426 ntBASIC14.9□□□□□ -0.02
VGLL1Q99990 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
VGLL1Q99990 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
VGLL1Q99990 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.9□□□□□ -0.02
VGLL1Q99990 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VGLL1Q99990 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
VGLL1Q99990 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VGLL1Q99990 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
VGLL1Q99990 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VGLL1Q99990 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VGLL1Q99990 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VGLL1Q99990 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VGLL1Q99990 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
VGLL1Q99990 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VGLL1Q99990 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VGLL1Q99990 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VGLL1Q99990 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VGLL1Q99990 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
VGLL1Q99990 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VGLL1Q99990 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VGLL1Q99990 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VGLL1Q99990 HACD1-201ENST00000326961 773 ntTSL 2 BASIC14.89□□□□□ -0.03
VGLL1Q99990 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
VGLL1Q99990 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VGLL1Q99990 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
VGLL1Q99990 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VGLL1Q99990 AL162412.1-201ENST00000567129 965 ntBASIC14.89□□□□□ -0.03
VGLL1Q99990 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
VGLL1Q99990 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC14.89□□□□□ -0.03
VGLL1Q99990 AC013268.1-206ENST00000638368 961 ntBASIC14.89□□□□□ -0.03
VGLL1Q99990 AC112229.1-201ENST00000639295 961 ntBASIC14.89□□□□□ -0.03
VGLL1Q99990 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VGLL1Q99990 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC14.89□□□□□ -0.03
VGLL1Q99990 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC14.89□□□□□ -0.03
VGLL1Q99990 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
VGLL1Q99990 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VGLL1Q99990 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC14.89□□□□□ -0.03
VGLL1Q99990 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
VGLL1Q99990 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VGLL1Q99990 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VGLL1Q99990 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC14.89□□□□□ -0.03
VGLL1Q99990 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VGLL1Q99990 TP73-202ENST00000354437 2140 ntTSL 5 BASIC14.89□□□□□ -0.03
VGLL1Q99990 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VGLL1Q99990 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VGLL1Q99990 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VGLL1Q99990 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
VGLL1Q99990 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
VGLL1Q99990 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms