Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCL13Q99616 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CCL13Q99616 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCL13Q99616 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCL13Q99616 KRT18P29-201ENST00000397031 1267 ntBASIC16.52■□□□□ 0.24
CCL13Q99616 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.52■□□□□ 0.24
CCL13Q99616 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCL13Q99616 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCL13Q99616 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.52■□□□□ 0.24
CCL13Q99616 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCL13Q99616 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCL13Q99616 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.52■□□□□ 0.24
CCL13Q99616 AC069544.1-201ENST00000609399 999 ntBASIC16.52■□□□□ 0.24
CCL13Q99616 AL121906.2-201ENST00000621597 723 ntBASIC16.52■□□□□ 0.24
CCL13Q99616 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCL13Q99616 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCL13Q99616 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCL13Q99616 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CCL13Q99616 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
CCL13Q99616 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCL13Q99616 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCL13Q99616 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCL13Q99616 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.52■□□□□ 0.23
CCL13Q99616 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCL13Q99616 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCL13Q99616 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCL13Q99616 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL13Q99616 AC116351.2-201ENST00000606540 1585 ntBASIC16.51■□□□□ 0.23
CCL13Q99616 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL13Q99616 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL13Q99616 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL13Q99616 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCL13Q99616 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCL13Q99616 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCL13Q99616 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CCL13Q99616 ABHD17AP1-201ENST00000358206 933 ntBASIC16.51■□□□□ 0.23
CCL13Q99616 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.51■□□□□ 0.23
CCL13Q99616 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL13Q99616 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.51■□□□□ 0.23
CCL13Q99616 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL13Q99616 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL13Q99616 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.51■□□□□ 0.23
CCL13Q99616 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL13Q99616 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCL13Q99616 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL13Q99616 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CCL13Q99616 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL13Q99616 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.5■□□□□ 0.23
CCL13Q99616 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL13Q99616 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.5■□□□□ 0.23
CCL13Q99616 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CCL13Q99616 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL13Q99616 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.5■□□□□ 0.23
CCL13Q99616 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.5■□□□□ 0.23
CCL13Q99616 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCL13Q99616 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL13Q99616 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CCL13Q99616 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
CCL13Q99616 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.5■□□□□ 0.23
CCL13Q99616 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CCL13Q99616 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.5■□□□□ 0.23
CCL13Q99616 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCL13Q99616 AL121829.2-201ENST00000620908 328 ntBASIC16.5■□□□□ 0.23
CCL13Q99616 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CCL13Q99616 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCL13Q99616 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL13Q99616 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCL13Q99616 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL13Q99616 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.5■□□□□ 0.23
CCL13Q99616 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.5■□□□□ 0.23
CCL13Q99616 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL13Q99616 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL13Q99616 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.49■□□□□ 0.23
CCL13Q99616 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
CCL13Q99616 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.49■□□□□ 0.23
CCL13Q99616 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCL13Q99616 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.49■□□□□ 0.23
CCL13Q99616 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCL13Q99616 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCL13Q99616 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.49■□□□□ 0.23
CCL13Q99616 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL13Q99616 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL13Q99616 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL13Q99616 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL13Q99616 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.49■□□□□ 0.23
CCL13Q99616 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCL13Q99616 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.49■□□□□ 0.23
CCL13Q99616 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.49■□□□□ 0.23
CCL13Q99616 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCL13Q99616 PRKY-204ENST00000533551 1019 ntBASIC16.49■□□□□ 0.23
CCL13Q99616 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.49■□□□□ 0.23
CCL13Q99616 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.49■□□□□ 0.23
CCL13Q99616 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCL13Q99616 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCL13Q99616 ITM2C-210ENST00000620962 501 ntBASIC16.49■□□□□ 0.23
CCL13Q99616 AP001271.2-201ENST00000624018 1556 ntBASIC16.49■□□□□ 0.23
CCL13Q99616 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.49■□□□□ 0.23
CCL13Q99616 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CCL13Q99616 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL13Q99616 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms