Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDK5RAP1Q96SZ6 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDK5RAP1Q96SZ6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDK5RAP1Q96SZ6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
CDK5RAP1Q96SZ6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.47■□□□□ 0.87
CDK5RAP1Q96SZ6 AC009237.14-201ENST00000609975 1594 ntBASIC20.47■□□□□ 0.87
CDK5RAP1Q96SZ6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDK5RAP1Q96SZ6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDK5RAP1Q96SZ6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDK5RAP1Q96SZ6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CDK5RAP1Q96SZ6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDK5RAP1Q96SZ6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDK5RAP1Q96SZ6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.47■□□□□ 0.87
CDK5RAP1Q96SZ6 KSR1P1-201ENST00000446298 240 ntBASIC20.47■□□□□ 0.87
CDK5RAP1Q96SZ6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.47■□□□□ 0.87
CDK5RAP1Q96SZ6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.47■□□□□ 0.87
CDK5RAP1Q96SZ6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.47■□□□□ 0.87
CDK5RAP1Q96SZ6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.47■□□□□ 0.87
CDK5RAP1Q96SZ6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.47■□□□□ 0.87
CDK5RAP1Q96SZ6 AC113410.3-201ENST00000623366 203 ntBASIC20.47■□□□□ 0.87
CDK5RAP1Q96SZ6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDK5RAP1Q96SZ6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.47■□□□□ 0.87
CDK5RAP1Q96SZ6 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.47■□□□□ 0.87
CDK5RAP1Q96SZ6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CDK5RAP1Q96SZ6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDK5RAP1Q96SZ6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDK5RAP1Q96SZ6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
CDK5RAP1Q96SZ6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDK5RAP1Q96SZ6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDK5RAP1Q96SZ6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.46■□□□□ 0.87
CDK5RAP1Q96SZ6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.46■□□□□ 0.87
CDK5RAP1Q96SZ6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
CDK5RAP1Q96SZ6 NIFKP9-201ENST00000419265 221 ntBASIC20.46■□□□□ 0.87
CDK5RAP1Q96SZ6 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.46■□□□□ 0.87
CDK5RAP1Q96SZ6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.46■□□□□ 0.87
CDK5RAP1Q96SZ6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.46■□□□□ 0.87
CDK5RAP1Q96SZ6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDK5RAP1Q96SZ6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CDK5RAP1Q96SZ6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDK5RAP1Q96SZ6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDK5RAP1Q96SZ6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDK5RAP1Q96SZ6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.45■□□□□ 0.86
CDK5RAP1Q96SZ6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CDK5RAP1Q96SZ6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDK5RAP1Q96SZ6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDK5RAP1Q96SZ6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CDK5RAP1Q96SZ6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.45■□□□□ 0.86
CDK5RAP1Q96SZ6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.45■□□□□ 0.86
CDK5RAP1Q96SZ6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDK5RAP1Q96SZ6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDK5RAP1Q96SZ6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDK5RAP1Q96SZ6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDK5RAP1Q96SZ6 TMEM179-206ENST00000616017 1645 ntBASIC20.45■□□□□ 0.86
CDK5RAP1Q96SZ6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDK5RAP1Q96SZ6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.45■□□□□ 0.86
CDK5RAP1Q96SZ6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CDK5RAP1Q96SZ6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.44■□□□□ 0.86
CDK5RAP1Q96SZ6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDK5RAP1Q96SZ6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.44■□□□□ 0.86
CDK5RAP1Q96SZ6 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDK5RAP1Q96SZ6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.44■□□□□ 0.86
CDK5RAP1Q96SZ6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDK5RAP1Q96SZ6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CDK5RAP1Q96SZ6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CDK5RAP1Q96SZ6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CDK5RAP1Q96SZ6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.44■□□□□ 0.86
CDK5RAP1Q96SZ6 CD177P1-201ENST00000606252 935 ntBASIC20.44■□□□□ 0.86
CDK5RAP1Q96SZ6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.44■□□□□ 0.86
CDK5RAP1Q96SZ6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.44■□□□□ 0.86
CDK5RAP1Q96SZ6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDK5RAP1Q96SZ6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDK5RAP1Q96SZ6 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CDK5RAP1Q96SZ6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.44■□□□□ 0.86
CDK5RAP1Q96SZ6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDK5RAP1Q96SZ6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CDK5RAP1Q96SZ6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDK5RAP1Q96SZ6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDK5RAP1Q96SZ6 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDK5RAP1Q96SZ6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.43■□□□□ 0.86
CDK5RAP1Q96SZ6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDK5RAP1Q96SZ6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDK5RAP1Q96SZ6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDK5RAP1Q96SZ6 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDK5RAP1Q96SZ6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDK5RAP1Q96SZ6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDK5RAP1Q96SZ6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDK5RAP1Q96SZ6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDK5RAP1Q96SZ6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDK5RAP1Q96SZ6 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.43■□□□□ 0.86
CDK5RAP1Q96SZ6 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.43■□□□□ 0.86
CDK5RAP1Q96SZ6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDK5RAP1Q96SZ6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDK5RAP1Q96SZ6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.43■□□□□ 0.86
CDK5RAP1Q96SZ6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDK5RAP1Q96SZ6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.43■□□□□ 0.86
CDK5RAP1Q96SZ6 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.43■□□□□ 0.86
CDK5RAP1Q96SZ6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.43■□□□□ 0.86
CDK5RAP1Q96SZ6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDK5RAP1Q96SZ6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDK5RAP1Q96SZ6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms