Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 AC011484.1-201ENST00000377652 1995 ntBASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 POM121L13P-201ENST00000422362 380 ntBASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 AC116562.4-201ENST00000641316 2276 ntBASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.67■■□□□ 1.06
RPGRIP1Q96KN7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
RPGRIP1Q96KN7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RPGRIP1Q96KN7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.66■■□□□ 1.06
RPGRIP1Q96KN7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPGRIP1Q96KN7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RPGRIP1Q96KN7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.66■■□□□ 1.06
RPGRIP1Q96KN7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPGRIP1Q96KN7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPGRIP1Q96KN7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RPGRIP1Q96KN7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPGRIP1Q96KN7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPGRIP1Q96KN7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.66■■□□□ 1.06
RPGRIP1Q96KN7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
RPGRIP1Q96KN7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPGRIP1Q96KN7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.66■■□□□ 1.06
RPGRIP1Q96KN7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
RPGRIP1Q96KN7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.66■■□□□ 1.06
RPGRIP1Q96KN7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPGRIP1Q96KN7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPGRIP1Q96KN7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.65■■□□□ 1.06
RPGRIP1Q96KN7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPGRIP1Q96KN7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
RPGRIP1Q96KN7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RPGRIP1Q96KN7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPGRIP1Q96KN7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.65■■□□□ 1.06
RPGRIP1Q96KN7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPGRIP1Q96KN7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
RPGRIP1Q96KN7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPGRIP1Q96KN7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RPGRIP1Q96KN7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
RPGRIP1Q96KN7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPGRIP1Q96KN7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPGRIP1Q96KN7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPGRIP1Q96KN7 AC245052.3-201ENST00000450182 901 ntBASIC21.65■■□□□ 1.06
RPGRIP1Q96KN7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.65■■□□□ 1.06
RPGRIP1Q96KN7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RPGRIP1Q96KN7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
RPGRIP1Q96KN7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RPGRIP1Q96KN7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPGRIP1Q96KN7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.65■■□□□ 1.06
RPGRIP1Q96KN7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.65■■□□□ 1.06
RPGRIP1Q96KN7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPGRIP1Q96KN7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.64■■□□□ 1.06
RPGRIP1Q96KN7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
RPGRIP1Q96KN7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RPGRIP1Q96KN7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
RPGRIP1Q96KN7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RPGRIP1Q96KN7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RPGRIP1Q96KN7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
RPGRIP1Q96KN7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
RPGRIP1Q96KN7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RPGRIP1Q96KN7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RPGRIP1Q96KN7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.64■■□□□ 1.05
RPGRIP1Q96KN7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.64■■□□□ 1.05
RPGRIP1Q96KN7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.64■■□□□ 1.05
RPGRIP1Q96KN7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.64■■□□□ 1.05
RPGRIP1Q96KN7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.64■■□□□ 1.05
RPGRIP1Q96KN7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.64■■□□□ 1.05
RPGRIP1Q96KN7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.64■■□□□ 1.05
RPGRIP1Q96KN7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RPGRIP1Q96KN7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
RPGRIP1Q96KN7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.64■■□□□ 1.05
RPGRIP1Q96KN7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RPGRIP1Q96KN7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RPGRIP1Q96KN7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RPGRIP1Q96KN7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RPGRIP1Q96KN7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.64■■□□□ 1.05
RPGRIP1Q96KN7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RPGRIP1Q96KN7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.63■■□□□ 1.05
RPGRIP1Q96KN7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.63■■□□□ 1.05
RPGRIP1Q96KN7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
RPGRIP1Q96KN7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPGRIP1Q96KN7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms