Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
IFT43Q96FT9 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.27■□□□□ 0.84
IFT43Q96FT9 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.27■□□□□ 0.84
IFT43Q96FT9 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IFT43Q96FT9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IFT43Q96FT9 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.27■□□□□ 0.84
IFT43Q96FT9 AL031963.3-201ENST00000606441 850 ntBASIC20.27■□□□□ 0.84
IFT43Q96FT9 PTBP1P-201ENST00000554374 1601 ntBASIC20.27■□□□□ 0.83
IFT43Q96FT9 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.27■□□□□ 0.83
IFT43Q96FT9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.26■□□□□ 0.83
IFT43Q96FT9 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IFT43Q96FT9 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
IFT43Q96FT9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IFT43Q96FT9 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.26■□□□□ 0.83
IFT43Q96FT9 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IFT43Q96FT9 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IFT43Q96FT9 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
IFT43Q96FT9 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IFT43Q96FT9 PNMA6B-201ENST00000538162 1200 ntBASIC20.26■□□□□ 0.83
IFT43Q96FT9 AC142381.4-202ENST00000563973 229 ntBASIC20.26■□□□□ 0.83
IFT43Q96FT9 AC073648.6-201ENST00000641589 218 ntBASIC20.26■□□□□ 0.83
IFT43Q96FT9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
IFT43Q96FT9 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
IFT43Q96FT9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IFT43Q96FT9 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
IFT43Q96FT9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
IFT43Q96FT9 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
IFT43Q96FT9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFT43Q96FT9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFT43Q96FT9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.25■□□□□ 0.83
IFT43Q96FT9 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
IFT43Q96FT9 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.25■□□□□ 0.83
IFT43Q96FT9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFT43Q96FT9 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
IFT43Q96FT9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFT43Q96FT9 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFT43Q96FT9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
IFT43Q96FT9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
IFT43Q96FT9 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
IFT43Q96FT9 AC008403.3-201ENST00000598924 454 ntBASIC20.25■□□□□ 0.83
IFT43Q96FT9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
IFT43Q96FT9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFT43Q96FT9 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
IFT43Q96FT9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
IFT43Q96FT9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFT43Q96FT9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFT43Q96FT9 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFT43Q96FT9 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFT43Q96FT9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFT43Q96FT9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFT43Q96FT9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
IFT43Q96FT9 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFT43Q96FT9 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
IFT43Q96FT9 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.25■□□□□ 0.83
IFT43Q96FT9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
IFT43Q96FT9 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.25■□□□□ 0.83
IFT43Q96FT9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
IFT43Q96FT9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFT43Q96FT9 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFT43Q96FT9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
IFT43Q96FT9 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
IFT43Q96FT9 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
IFT43Q96FT9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFT43Q96FT9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFT43Q96FT9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.24■□□□□ 0.83
IFT43Q96FT9 UNC93B4-201ENST00000505679 747 ntBASIC20.24■□□□□ 0.83
IFT43Q96FT9 AC023632.3-201ENST00000521633 145 ntBASIC20.24■□□□□ 0.83
IFT43Q96FT9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.24■□□□□ 0.83
IFT43Q96FT9 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.24■□□□□ 0.83
IFT43Q96FT9 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFT43Q96FT9 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFT43Q96FT9 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
IFT43Q96FT9 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFT43Q96FT9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
IFT43Q96FT9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFT43Q96FT9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFT43Q96FT9 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.24■□□□□ 0.83
IFT43Q96FT9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.24■□□□□ 0.83
IFT43Q96FT9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
IFT43Q96FT9 AFG3L1P-217ENST00000557444 2447 ntBASIC20.23■□□□□ 0.83
IFT43Q96FT9 AC112907.3-201ENST00000577781 2400 ntBASIC20.23■□□□□ 0.83
IFT43Q96FT9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
IFT43Q96FT9 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.23■□□□□ 0.83
IFT43Q96FT9 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
IFT43Q96FT9 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
IFT43Q96FT9 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.23■□□□□ 0.83
IFT43Q96FT9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.23■□□□□ 0.83
IFT43Q96FT9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IFT43Q96FT9 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
IFT43Q96FT9 AC092368.3-202ENST00000574180 1591 ntBASIC20.23■□□□□ 0.83
IFT43Q96FT9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
IFT43Q96FT9 BX119927.1-201ENST00000636596 1552 ntBASIC20.23■□□□□ 0.83
IFT43Q96FT9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
IFT43Q96FT9 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.23■□□□□ 0.83
IFT43Q96FT9 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.23■□□□□ 0.83
IFT43Q96FT9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IFT43Q96FT9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
IFT43Q96FT9 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IFT43Q96FT9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.22■□□□□ 0.83
IFT43Q96FT9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms