Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC58Q96CX6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC58Q96CX6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC58Q96CX6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC58Q96CX6 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC58Q96CX6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC58Q96CX6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC58Q96CX6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC58Q96CX6 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC58Q96CX6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.73■□□□□ 0.59
LRRC58Q96CX6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.73■□□□□ 0.59
LRRC58Q96CX6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC58Q96CX6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC58Q96CX6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC58Q96CX6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC58Q96CX6 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC58Q96CX6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
LRRC58Q96CX6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
LRRC58Q96CX6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC58Q96CX6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.73■□□□□ 0.59
LRRC58Q96CX6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC58Q96CX6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.73■□□□□ 0.59
LRRC58Q96CX6 AL162412.1-201ENST00000567129 965 ntBASIC18.73■□□□□ 0.59
LRRC58Q96CX6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.73■□□□□ 0.59
LRRC58Q96CX6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.73■□□□□ 0.59
LRRC58Q96CX6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC58Q96CX6 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.73■□□□□ 0.59
LRRC58Q96CX6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC58Q96CX6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC58Q96CX6 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC58Q96CX6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
LRRC58Q96CX6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
LRRC58Q96CX6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.73■□□□□ 0.59
LRRC58Q96CX6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.73■□□□□ 0.59
LRRC58Q96CX6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC58Q96CX6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
LRRC58Q96CX6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
LRRC58Q96CX6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC58Q96CX6 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.72■□□□□ 0.59
LRRC58Q96CX6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
LRRC58Q96CX6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC58Q96CX6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC58Q96CX6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC58Q96CX6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.72■□□□□ 0.59
LRRC58Q96CX6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LRRC58Q96CX6 AC016405.3-201ENST00000607710 860 ntBASIC18.72■□□□□ 0.59
LRRC58Q96CX6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC58Q96CX6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC58Q96CX6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC58Q96CX6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC58Q96CX6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC58Q96CX6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC58Q96CX6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC58Q96CX6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC58Q96CX6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC58Q96CX6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
LRRC58Q96CX6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
LRRC58Q96CX6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC58Q96CX6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LRRC58Q96CX6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LRRC58Q96CX6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.71■□□□□ 0.59
LRRC58Q96CX6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LRRC58Q96CX6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.71■□□□□ 0.59
LRRC58Q96CX6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC58Q96CX6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC58Q96CX6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC58Q96CX6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC58Q96CX6 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC58Q96CX6 KRT18P61-201ENST00000585825 1298 ntBASIC18.71■□□□□ 0.59
LRRC58Q96CX6 AC010536.3-201ENST00000620306 533 ntBASIC18.71■□□□□ 0.59
LRRC58Q96CX6 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.71■□□□□ 0.59
LRRC58Q96CX6 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.71■□□□□ 0.59
LRRC58Q96CX6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC58Q96CX6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC58Q96CX6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
LRRC58Q96CX6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
LRRC58Q96CX6 PHGDH-210ENST00000641115 1638 ntBASIC18.71■□□□□ 0.58
LRRC58Q96CX6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
LRRC58Q96CX6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC58Q96CX6 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC58Q96CX6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC58Q96CX6 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC58Q96CX6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC58Q96CX6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC58Q96CX6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC58Q96CX6 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.7■□□□□ 0.58
LRRC58Q96CX6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.7■□□□□ 0.58
LRRC58Q96CX6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC58Q96CX6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC58Q96CX6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
LRRC58Q96CX6 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC58Q96CX6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC58Q96CX6 CROCCP3-202ENST00000420820 1947 ntBASIC18.7■□□□□ 0.58
LRRC58Q96CX6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC58Q96CX6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC58Q96CX6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.7■□□□□ 0.58
LRRC58Q96CX6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.7■□□□□ 0.58
LRRC58Q96CX6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.7■□□□□ 0.58
LRRC58Q96CX6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC58Q96CX6 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms