Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.46■□□□□ 0.71
USP7Q93009 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP7Q93009 AC073912.3-201ENST00000624414 853 ntBASIC19.46■□□□□ 0.71
USP7Q93009 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
USP7Q93009 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.46■□□□□ 0.71
USP7Q93009 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
USP7Q93009 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP7Q93009 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP7Q93009 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP7Q93009 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP7Q93009 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP7Q93009 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP7Q93009 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP7Q93009 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP7Q93009 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.45■□□□□ 0.7
USP7Q93009 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.45■□□□□ 0.7
USP7Q93009 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP7Q93009 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP7Q93009 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP7Q93009 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP7Q93009 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
USP7Q93009 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP7Q93009 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.45■□□□□ 0.7
USP7Q93009 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.45■□□□□ 0.7
USP7Q93009 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP7Q93009 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.45■□□□□ 0.7
USP7Q93009 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP7Q93009 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP7Q93009 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
USP7Q93009 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP7Q93009 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.45■□□□□ 0.7
USP7Q93009 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP7Q93009 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP7Q93009 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.45■□□□□ 0.7
USP7Q93009 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
USP7Q93009 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
USP7Q93009 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP7Q93009 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
USP7Q93009 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP7Q93009 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP7Q93009 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP7Q93009 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP7Q93009 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP7Q93009 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP7Q93009 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.44■□□□□ 0.7
USP7Q93009 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP7Q93009 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP7Q93009 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP7Q93009 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP7Q93009 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.44■□□□□ 0.7
USP7Q93009 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP7Q93009 ECEL1P3-201ENST00000427961 737 ntBASIC19.44■□□□□ 0.7
USP7Q93009 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP7Q93009 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP7Q93009 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.44■□□□□ 0.7
USP7Q93009 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
USP7Q93009 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP7Q93009 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP7Q93009 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP7Q93009 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.44■□□□□ 0.7
USP7Q93009 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP7Q93009 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP7Q93009 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP7Q93009 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP7Q93009 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP7Q93009 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP7Q93009 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP7Q93009 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP7Q93009 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP7Q93009 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.44■□□□□ 0.7
USP7Q93009 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
USP7Q93009 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP7Q93009 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP7Q93009 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.43■□□□□ 0.7
USP7Q93009 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP7Q93009 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP7Q93009 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USP7Q93009 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP7Q93009 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USP7Q93009 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USP7Q93009 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
USP7Q93009 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.43■□□□□ 0.7
USP7Q93009 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USP7Q93009 MTDHP1-201ENST00000605323 784 ntBASIC19.43■□□□□ 0.7
USP7Q93009 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP7Q93009 REXO1L12P-201ENST00000622156 912 ntBASIC19.43■□□□□ 0.7
USP7Q93009 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USP7Q93009 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP7Q93009 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP7Q93009 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.43■□□□□ 0.7
USP7Q93009 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
USP7Q93009 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USP7Q93009 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP7Q93009 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP7Q93009 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
USP7Q93009 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP7Q93009 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP7Q93009 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP7Q93009 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP7Q93009 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms