Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.92■□□□□ 0.46
HPS1Q92902 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS1Q92902 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS1Q92902 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS1Q92902 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS1Q92902 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.92■□□□□ 0.46
HPS1Q92902 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HPS1Q92902 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HPS1Q92902 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS1Q92902 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.92■□□□□ 0.46
HPS1Q92902 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
HPS1Q92902 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS1Q92902 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS1Q92902 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS1Q92902 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
HPS1Q92902 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS1Q92902 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS1Q92902 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.92■□□□□ 0.46
HPS1Q92902 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS1Q92902 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS1Q92902 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS1Q92902 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HPS1Q92902 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.91■□□□□ 0.46
HPS1Q92902 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HPS1Q92902 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS1Q92902 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HPS1Q92902 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS1Q92902 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HPS1Q92902 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
HPS1Q92902 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
HPS1Q92902 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS1Q92902 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.91■□□□□ 0.46
HPS1Q92902 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS1Q92902 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS1Q92902 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS1Q92902 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
HPS1Q92902 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPS1Q92902 AC125437.2-201ENST00000625180 2167 ntBASIC17.9■□□□□ 0.46
HPS1Q92902 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HPS1Q92902 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HPS1Q92902 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPS1Q92902 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.9■□□□□ 0.46
HPS1Q92902 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPS1Q92902 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.9■□□□□ 0.46
HPS1Q92902 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPS1Q92902 NCF1B-203ENST00000435988 1254 ntBASIC17.9■□□□□ 0.46
HPS1Q92902 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HPS1Q92902 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.9■□□□□ 0.46
HPS1Q92902 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.9■□□□□ 0.46
HPS1Q92902 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.9■□□□□ 0.46
HPS1Q92902 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.9■□□□□ 0.46
HPS1Q92902 AC104771.1-201ENST00000603335 964 ntBASIC17.9■□□□□ 0.46
HPS1Q92902 AC104187.1-201ENST00000607510 612 ntBASIC17.9■□□□□ 0.46
HPS1Q92902 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HPS1Q92902 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPS1Q92902 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.9■□□□□ 0.46
HPS1Q92902 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.9■□□□□ 0.46
HPS1Q92902 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.9■□□□□ 0.46
HPS1Q92902 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HPS1Q92902 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
HPS1Q92902 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
HPS1Q92902 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.9■□□□□ 0.46
HPS1Q92902 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPS1Q92902 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HPS1Q92902 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPS1Q92902 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPS1Q92902 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.9■□□□□ 0.46
HPS1Q92902 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPS1Q92902 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPS1Q92902 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.9■□□□□ 0.46
HPS1Q92902 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HPS1Q92902 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HPS1Q92902 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HPS1Q92902 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.89■□□□□ 0.45
HPS1Q92902 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HPS1Q92902 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HPS1Q92902 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HPS1Q92902 AC012313.1-201ENST00000593393 3059 ntBASIC17.89■□□□□ 0.45
HPS1Q92902 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HPS1Q92902 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HPS1Q92902 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HPS1Q92902 CROCCP5-201ENST00000436658 830 ntBASIC17.89■□□□□ 0.45
HPS1Q92902 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.89■□□□□ 0.45
HPS1Q92902 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HPS1Q92902 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HPS1Q92902 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HPS1Q92902 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.89■□□□□ 0.45
HPS1Q92902 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HPS1Q92902 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HPS1Q92902 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HPS1Q92902 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HPS1Q92902 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.89■□□□□ 0.45
HPS1Q92902 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HPS1Q92902 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HPS1Q92902 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.89■□□□□ 0.45
HPS1Q92902 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
HPS1Q92902 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
HPS1Q92902 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HPS1Q92902 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HPS1Q92902 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms