Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.59■□□□□ 0.57
TM9SF4Q92544 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
TM9SF4Q92544 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.59■□□□□ 0.57
TM9SF4Q92544 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.59■□□□□ 0.57
TM9SF4Q92544 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM9SF4Q92544 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TM9SF4Q92544 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TM9SF4Q92544 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TM9SF4Q92544 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.59■□□□□ 0.57
TM9SF4Q92544 BX088651.1-201ENST00000540551 451 ntBASIC18.59■□□□□ 0.57
TM9SF4Q92544 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.59■□□□□ 0.57
TM9SF4Q92544 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.59■□□□□ 0.57
TM9SF4Q92544 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM9SF4Q92544 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM9SF4Q92544 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM9SF4Q92544 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM9SF4Q92544 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM9SF4Q92544 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TM9SF4Q92544 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM9SF4Q92544 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.59■□□□□ 0.57
TM9SF4Q92544 AIRN-201ENST00000601203 4374 ntBASIC18.58■□□□□ 0.57
TM9SF4Q92544 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.58■□□□□ 0.57
TM9SF4Q92544 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TM9SF4Q92544 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TM9SF4Q92544 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TM9SF4Q92544 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.58■□□□□ 0.57
TM9SF4Q92544 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TM9SF4Q92544 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TM9SF4Q92544 AC211429.1-201ENST00000415277 523 ntBASIC18.58■□□□□ 0.56
TM9SF4Q92544 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.58■□□□□ 0.56
TM9SF4Q92544 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.58■□□□□ 0.56
TM9SF4Q92544 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TM9SF4Q92544 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TM9SF4Q92544 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TM9SF4Q92544 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TM9SF4Q92544 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TM9SF4Q92544 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.58■□□□□ 0.56
TM9SF4Q92544 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TM9SF4Q92544 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.58■□□□□ 0.56
TM9SF4Q92544 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM9SF4Q92544 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TM9SF4Q92544 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TM9SF4Q92544 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.57■□□□□ 0.56
TM9SF4Q92544 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.57■□□□□ 0.56
TM9SF4Q92544 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.57■□□□□ 0.56
TM9SF4Q92544 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM9SF4Q92544 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.57■□□□□ 0.56
TM9SF4Q92544 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM9SF4Q92544 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM9SF4Q92544 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TM9SF4Q92544 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.57■□□□□ 0.56
TM9SF4Q92544 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
TM9SF4Q92544 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TM9SF4Q92544 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TM9SF4Q92544 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TM9SF4Q92544 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.57■□□□□ 0.56
TM9SF4Q92544 TSPY7P-201ENST00000431358 1114 ntBASIC18.57■□□□□ 0.56
TM9SF4Q92544 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM9SF4Q92544 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TM9SF4Q92544 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM9SF4Q92544 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.57■□□□□ 0.56
TM9SF4Q92544 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.57■□□□□ 0.56
TM9SF4Q92544 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.57■□□□□ 0.56
TM9SF4Q92544 AC007225.1-201ENST00000566331 1836 ntBASIC18.57■□□□□ 0.56
TM9SF4Q92544 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM9SF4Q92544 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM9SF4Q92544 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.57■□□□□ 0.56
TM9SF4Q92544 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TM9SF4Q92544 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.57■□□□□ 0.56
TM9SF4Q92544 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.57■□□□□ 0.56
TM9SF4Q92544 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TM9SF4Q92544 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM9SF4Q92544 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM9SF4Q92544 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM9SF4Q92544 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.57■□□□□ 0.56
TM9SF4Q92544 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.56■□□□□ 0.56
TM9SF4Q92544 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TM9SF4Q92544 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TM9SF4Q92544 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.56■□□□□ 0.56
TM9SF4Q92544 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TM9SF4Q92544 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.56■□□□□ 0.56
TM9SF4Q92544 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TM9SF4Q92544 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TM9SF4Q92544 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TM9SF4Q92544 AC011484.1-201ENST00000377652 1995 ntBASIC18.56■□□□□ 0.56
TM9SF4Q92544 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TM9SF4Q92544 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TM9SF4Q92544 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TM9SF4Q92544 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TM9SF4Q92544 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TM9SF4Q92544 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.56■□□□□ 0.56
TM9SF4Q92544 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TM9SF4Q92544 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.56■□□□□ 0.56
TM9SF4Q92544 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.56■□□□□ 0.56
TM9SF4Q92544 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TM9SF4Q92544 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TM9SF4Q92544 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TM9SF4Q92544 AC121338.2-201ENST00000622535 1744 ntBASIC18.56■□□□□ 0.56
TM9SF4Q92544 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TM9SF4Q92544 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms