Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH19Q8TAB3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH19Q8TAB3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PCDH19Q8TAB3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDH19Q8TAB3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH19Q8TAB3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH19Q8TAB3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH19Q8TAB3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDH19Q8TAB3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PCDH19Q8TAB3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDH19Q8TAB3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.36■□□□□ 0.85
PCDH19Q8TAB3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH19Q8TAB3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH19Q8TAB3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH19Q8TAB3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
PCDH19Q8TAB3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH19Q8TAB3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH19Q8TAB3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDH19Q8TAB3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDH19Q8TAB3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
PCDH19Q8TAB3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDH19Q8TAB3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH19Q8TAB3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH19Q8TAB3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDH19Q8TAB3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH19Q8TAB3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDH19Q8TAB3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.35■□□□□ 0.85
PCDH19Q8TAB3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH19Q8TAB3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH19Q8TAB3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH19Q8TAB3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH19Q8TAB3 AC007952.6-201ENST00000573168 2673 ntBASIC20.35■□□□□ 0.85
PCDH19Q8TAB3 AC003957.1-201ENST00000625108 2673 ntBASIC20.35■□□□□ 0.85
PCDH19Q8TAB3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH19Q8TAB3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDH19Q8TAB3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH19Q8TAB3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH19Q8TAB3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDH19Q8TAB3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH19Q8TAB3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDH19Q8TAB3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PCDH19Q8TAB3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH19Q8TAB3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDH19Q8TAB3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH19Q8TAB3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.34■□□□□ 0.85
PCDH19Q8TAB3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.34■□□□□ 0.85
PCDH19Q8TAB3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH19Q8TAB3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.34■□□□□ 0.85
PCDH19Q8TAB3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDH19Q8TAB3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
PCDH19Q8TAB3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH19Q8TAB3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH19Q8TAB3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH19Q8TAB3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH19Q8TAB3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
PCDH19Q8TAB3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH19Q8TAB3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDH19Q8TAB3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH19Q8TAB3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PCDH19Q8TAB3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
PCDH19Q8TAB3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.33■□□□□ 0.85
PCDH19Q8TAB3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDH19Q8TAB3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDH19Q8TAB3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
PCDH19Q8TAB3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDH19Q8TAB3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDH19Q8TAB3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PCDH19Q8TAB3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDH19Q8TAB3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDH19Q8TAB3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDH19Q8TAB3 POU5F1P3-201ENST00000428824 1078 ntBASIC20.33■□□□□ 0.85
PCDH19Q8TAB3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PCDH19Q8TAB3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.33■□□□□ 0.85
PCDH19Q8TAB3 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.33■□□□□ 0.85
PCDH19Q8TAB3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.33■□□□□ 0.85
PCDH19Q8TAB3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.33■□□□□ 0.85
PCDH19Q8TAB3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
PCDH19Q8TAB3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.33■□□□□ 0.85
PCDH19Q8TAB3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PCDH19Q8TAB3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
PCDH19Q8TAB3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
PCDH19Q8TAB3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
PCDH19Q8TAB3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDH19Q8TAB3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDH19Q8TAB3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDH19Q8TAB3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH19Q8TAB3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PCDH19Q8TAB3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH19Q8TAB3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH19Q8TAB3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDH19Q8TAB3 AC093484.2-201ENST00000580996 2166 ntBASIC20.32■□□□□ 0.84
PCDH19Q8TAB3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH19Q8TAB3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH19Q8TAB3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH19Q8TAB3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PCDH19Q8TAB3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH19Q8TAB3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PCDH19Q8TAB3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH19Q8TAB3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH19Q8TAB3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms