Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 AC013268.1-206ENST00000638368 961 ntBASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 AC112229.1-201ENST00000639295 961 ntBASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DNAAF1Q8NEP3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DNAAF1Q8NEP3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.3■□□□□ 0.36
DNAAF1Q8NEP3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
DNAAF1Q8NEP3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
DNAAF1Q8NEP3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DNAAF1Q8NEP3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DNAAF1Q8NEP3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DNAAF1Q8NEP3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DNAAF1Q8NEP3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DNAAF1Q8NEP3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.3■□□□□ 0.36
DNAAF1Q8NEP3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.3■□□□□ 0.36
DNAAF1Q8NEP3 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.3■□□□□ 0.36
DNAAF1Q8NEP3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.3■□□□□ 0.36
DNAAF1Q8NEP3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.3■□□□□ 0.36
DNAAF1Q8NEP3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DNAAF1Q8NEP3 AL356652.1-201ENST00000615962 565 ntBASIC17.3■□□□□ 0.36
DNAAF1Q8NEP3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DNAAF1Q8NEP3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
DNAAF1Q8NEP3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.3■□□□□ 0.36
DNAAF1Q8NEP3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.3■□□□□ 0.36
DNAAF1Q8NEP3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.3■□□□□ 0.36
DNAAF1Q8NEP3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DNAAF1Q8NEP3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DNAAF1Q8NEP3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DNAAF1Q8NEP3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
DNAAF1Q8NEP3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
DNAAF1Q8NEP3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DNAAF1Q8NEP3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.29■□□□□ 0.36
DNAAF1Q8NEP3 Z82202.1-201ENST00000623446 1880 ntBASIC17.29■□□□□ 0.36
DNAAF1Q8NEP3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
DNAAF1Q8NEP3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.29■□□□□ 0.36
DNAAF1Q8NEP3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.29■□□□□ 0.36
DNAAF1Q8NEP3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
DNAAF1Q8NEP3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
DNAAF1Q8NEP3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DNAAF1Q8NEP3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DNAAF1Q8NEP3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.29■□□□□ 0.36
DNAAF1Q8NEP3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
DNAAF1Q8NEP3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DNAAF1Q8NEP3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
DNAAF1Q8NEP3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
DNAAF1Q8NEP3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DNAAF1Q8NEP3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
DNAAF1Q8NEP3 AC093503.3-201ENST00000624917 2352 ntBASIC17.29■□□□□ 0.36
DNAAF1Q8NEP3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
DNAAF1Q8NEP3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DNAAF1Q8NEP3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DNAAF1Q8NEP3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DNAAF1Q8NEP3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms