Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN22Q8N7P3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN22Q8N7P3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN22Q8N7P3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN22Q8N7P3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN22Q8N7P3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN22Q8N7P3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN22Q8N7P3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.94■□□□□ 0.46
CLDN22Q8N7P3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN22Q8N7P3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN22Q8N7P3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN22Q8N7P3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN22Q8N7P3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CLDN22Q8N7P3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN22Q8N7P3 AC007322.1-201ENST00000426983 750 ntBASIC17.94■□□□□ 0.46
CLDN22Q8N7P3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.94■□□□□ 0.46
CLDN22Q8N7P3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN22Q8N7P3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN22Q8N7P3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN22Q8N7P3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CLDN22Q8N7P3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN22Q8N7P3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN22Q8N7P3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN22Q8N7P3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CLDN22Q8N7P3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN22Q8N7P3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
CLDN22Q8N7P3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN22Q8N7P3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN22Q8N7P3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN22Q8N7P3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN22Q8N7P3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN22Q8N7P3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN22Q8N7P3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN22Q8N7P3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN22Q8N7P3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN22Q8N7P3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN22Q8N7P3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CLDN22Q8N7P3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN22Q8N7P3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
CLDN22Q8N7P3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN22Q8N7P3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN22Q8N7P3 HLA-G-202ENST00000376815 851 ntBASIC17.93■□□□□ 0.46
CLDN22Q8N7P3 HLA-G-203ENST00000376818 1127 ntBASIC17.93■□□□□ 0.46
CLDN22Q8N7P3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN22Q8N7P3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.93■□□□□ 0.46
CLDN22Q8N7P3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN22Q8N7P3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.93■□□□□ 0.46
CLDN22Q8N7P3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN22Q8N7P3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN22Q8N7P3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN22Q8N7P3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN22Q8N7P3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN22Q8N7P3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CLDN22Q8N7P3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CLDN22Q8N7P3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN22Q8N7P3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 LETM1P2-201ENST00000597330 2178 ntBASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 AC093787.1-201ENST00000450396 207 ntBASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 AC231657.2-201ENST00000624556 255 ntBASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN22Q8N7P3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN22Q8N7P3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN22Q8N7P3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN22Q8N7P3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN22Q8N7P3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CLDN22Q8N7P3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CLDN22Q8N7P3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN22Q8N7P3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN22Q8N7P3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN22Q8N7P3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms