Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIX5Q8N196 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.21■□□□□ 0.83
SIX5Q8N196 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.21■□□□□ 0.83
SIX5Q8N196 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIX5Q8N196 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIX5Q8N196 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIX5Q8N196 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
SIX5Q8N196 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIX5Q8N196 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIX5Q8N196 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIX5Q8N196 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIX5Q8N196 PCED1CP-201ENST00000419887 785 ntBASIC20.2■□□□□ 0.82
SIX5Q8N196 DUSP5P1-201ENST00000441325 1139 ntBASIC20.2■□□□□ 0.82
SIX5Q8N196 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
SIX5Q8N196 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.2■□□□□ 0.82
SIX5Q8N196 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SIX5Q8N196 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.2■□□□□ 0.82
SIX5Q8N196 AC116562.4-202ENST00000641738 218 ntBASIC20.2■□□□□ 0.82
SIX5Q8N196 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SIX5Q8N196 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIX5Q8N196 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.2■□□□□ 0.82
SIX5Q8N196 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIX5Q8N196 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.2■□□□□ 0.82
SIX5Q8N196 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SIX5Q8N196 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SIX5Q8N196 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
SIX5Q8N196 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SIX5Q8N196 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SIX5Q8N196 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SIX5Q8N196 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
SIX5Q8N196 COX11P1-201ENST00000489116 835 ntBASIC20.19■□□□□ 0.82
SIX5Q8N196 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SIX5Q8N196 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.19■□□□□ 0.82
SIX5Q8N196 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.19■□□□□ 0.82
SIX5Q8N196 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SIX5Q8N196 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SIX5Q8N196 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SIX5Q8N196 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SIX5Q8N196 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SIX5Q8N196 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SIX5Q8N196 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
SIX5Q8N196 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SIX5Q8N196 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.18■□□□□ 0.82
SIX5Q8N196 AL450487.1-201ENST00000426799 995 ntBASIC20.18■□□□□ 0.82
SIX5Q8N196 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SIX5Q8N196 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.18■□□□□ 0.82
SIX5Q8N196 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.18■□□□□ 0.82
SIX5Q8N196 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SIX5Q8N196 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SIX5Q8N196 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SIX5Q8N196 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SIX5Q8N196 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SIX5Q8N196 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SIX5Q8N196 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.17■□□□□ 0.82
SIX5Q8N196 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SIX5Q8N196 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
SIX5Q8N196 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.17■□□□□ 0.82
SIX5Q8N196 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SIX5Q8N196 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.17■□□□□ 0.82
SIX5Q8N196 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.17■□□□□ 0.82
SIX5Q8N196 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SIX5Q8N196 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.17■□□□□ 0.82
SIX5Q8N196 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.17■□□□□ 0.82
SIX5Q8N196 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.17■□□□□ 0.82
SIX5Q8N196 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SIX5Q8N196 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.17■□□□□ 0.82
SIX5Q8N196 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.17■□□□□ 0.82
SIX5Q8N196 AC242852.2-201ENST00000615738 1807 ntBASIC20.17■□□□□ 0.82
SIX5Q8N196 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SIX5Q8N196 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SIX5Q8N196 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SIX5Q8N196 IER3-202ENST00000376377 1350 ntBASIC20.17■□□□□ 0.82
SIX5Q8N196 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SIX5Q8N196 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SIX5Q8N196 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SIX5Q8N196 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SIX5Q8N196 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.16■□□□□ 0.82
SIX5Q8N196 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.16■□□□□ 0.82
SIX5Q8N196 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.16■□□□□ 0.82
SIX5Q8N196 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIX5Q8N196 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIX5Q8N196 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIX5Q8N196 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIX5Q8N196 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIX5Q8N196 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.16■□□□□ 0.82
SIX5Q8N196 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIX5Q8N196 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIX5Q8N196 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.16■□□□□ 0.82
SIX5Q8N196 CCR12P-201ENST00000446203 998 ntBASIC20.16■□□□□ 0.82
SIX5Q8N196 FAM86EP-206ENST00000510506 987 ntBASIC20.16■□□□□ 0.82
SIX5Q8N196 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIX5Q8N196 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.16■□□□□ 0.82
SIX5Q8N196 AP000692.2-201ENST00000608391 879 ntBASIC20.16■□□□□ 0.82
SIX5Q8N196 AC130371.2-201ENST00000619443 611 ntBASIC20.16■□□□□ 0.82
SIX5Q8N196 AL121956.5-201ENST00000625261 221 ntBASIC20.16■□□□□ 0.82
SIX5Q8N196 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
SIX5Q8N196 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SIX5Q8N196 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIX5Q8N196 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SIX5Q8N196 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms