Protein–RNA interactions for Protein: Q8IYB3

SRRM1, Serine/arginine repetitive matrix protein 1, humanhuman

Known RBP Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1Q8IYB3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SRRM1Q8IYB3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SRRM1Q8IYB3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SRRM1Q8IYB3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.96■□□□□ 0.79
SRRM1Q8IYB3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.96■□□□□ 0.79
SRRM1Q8IYB3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SRRM1Q8IYB3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.96■□□□□ 0.79
SRRM1Q8IYB3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SRRM1Q8IYB3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
SRRM1Q8IYB3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SRRM1Q8IYB3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SRRM1Q8IYB3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SRRM1Q8IYB3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
SRRM1Q8IYB3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SRRM1Q8IYB3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRRM1Q8IYB3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRRM1Q8IYB3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRRM1Q8IYB3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SRRM1Q8IYB3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.95■□□□□ 0.78
SRRM1Q8IYB3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRRM1Q8IYB3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SRRM1Q8IYB3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRRM1Q8IYB3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRRM1Q8IYB3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRRM1Q8IYB3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRRM1Q8IYB3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRRM1Q8IYB3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRRM1Q8IYB3 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.95■□□□□ 0.78
SRRM1Q8IYB3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.95■□□□□ 0.78
SRRM1Q8IYB3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.95■□□□□ 0.78
SRRM1Q8IYB3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.95■□□□□ 0.78
SRRM1Q8IYB3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SRRM1Q8IYB3 TMEM191A-211ENST00000637163 1067 ntBASIC19.95■□□□□ 0.78
SRRM1Q8IYB3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRRM1Q8IYB3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SRRM1Q8IYB3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRRM1Q8IYB3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRRM1Q8IYB3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.95■□□□□ 0.78
SRRM1Q8IYB3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.95■□□□□ 0.78
SRRM1Q8IYB3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SRRM1Q8IYB3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.94■□□□□ 0.78
SRRM1Q8IYB3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRRM1Q8IYB3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRRM1Q8IYB3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SRRM1Q8IYB3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
SRRM1Q8IYB3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SRRM1Q8IYB3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRRM1Q8IYB3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRRM1Q8IYB3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.94■□□□□ 0.78
SRRM1Q8IYB3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
SRRM1Q8IYB3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SRRM1Q8IYB3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRRM1Q8IYB3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SRRM1Q8IYB3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SRRM1Q8IYB3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SRRM1Q8IYB3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.94■□□□□ 0.78
SRRM1Q8IYB3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.94■□□□□ 0.78
SRRM1Q8IYB3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SRRM1Q8IYB3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SRRM1Q8IYB3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.94■□□□□ 0.78
SRRM1Q8IYB3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRRM1Q8IYB3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRRM1Q8IYB3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRRM1Q8IYB3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
SRRM1Q8IYB3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.94■□□□□ 0.78
SRRM1Q8IYB3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SRRM1Q8IYB3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRRM1Q8IYB3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM1Q8IYB3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM1Q8IYB3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SRRM1Q8IYB3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM1Q8IYB3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM1Q8IYB3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM1Q8IYB3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM1Q8IYB3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM1Q8IYB3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM1Q8IYB3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.93■□□□□ 0.78
SRRM1Q8IYB3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM1Q8IYB3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.93■□□□□ 0.78
SRRM1Q8IYB3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM1Q8IYB3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM1Q8IYB3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM1Q8IYB3 YBX1P1-201ENST00000445822 960 ntBASIC19.93■□□□□ 0.78
SRRM1Q8IYB3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.93■□□□□ 0.78
SRRM1Q8IYB3 KRT18P20-201ENST00000548986 1279 ntBASIC19.93■□□□□ 0.78
SRRM1Q8IYB3 AL356652.1-201ENST00000615962 565 ntBASIC19.93■□□□□ 0.78
SRRM1Q8IYB3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM1Q8IYB3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM1Q8IYB3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SRRM1Q8IYB3 AC138932.1-201ENST00000534164 6830 ntBASIC19.93■□□□□ 0.78
SRRM1Q8IYB3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM1Q8IYB3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM1Q8IYB3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM1Q8IYB3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM1Q8IYB3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM1Q8IYB3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
SRRM1Q8IYB3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.92■□□□□ 0.78
SRRM1Q8IYB3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SRRM1Q8IYB3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SRRM1Q8IYB3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms