Protein–RNA interactions for Protein: Q86YD7

FAM90A1, Protein FAM90A1, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1Q86YD7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FAM90A1Q86YD7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FAM90A1Q86YD7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.58■□□□□ 0.24
FAM90A1Q86YD7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.58■□□□□ 0.24
FAM90A1Q86YD7 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.58■□□□□ 0.24
FAM90A1Q86YD7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FAM90A1Q86YD7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
FAM90A1Q86YD7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.58■□□□□ 0.24
FAM90A1Q86YD7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FAM90A1Q86YD7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
FAM90A1Q86YD7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 TFP1-202ENST00000475455 1573 ntBASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 AL121829.2-201ENST00000620908 328 ntBASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM90A1Q86YD7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 KRT18P29-201ENST00000397031 1267 ntBASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 ITM2C-210ENST00000620962 501 ntBASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 AFG3L1P-217ENST00000557444 2447 ntBASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM90A1Q86YD7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FAM90A1Q86YD7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
FAM90A1Q86YD7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FAM90A1Q86YD7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FAM90A1Q86YD7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
FAM90A1Q86YD7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FAM90A1Q86YD7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.55■□□□□ 0.24
FAM90A1Q86YD7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.55■□□□□ 0.24
FAM90A1Q86YD7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FAM90A1Q86YD7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.55■□□□□ 0.24
FAM90A1Q86YD7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FAM90A1Q86YD7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.55■□□□□ 0.24
FAM90A1Q86YD7 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.55■□□□□ 0.24
FAM90A1Q86YD7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms