Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHFQ7M4L6 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SHFQ7M4L6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SHFQ7M4L6 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SHFQ7M4L6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SHFQ7M4L6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHFQ7M4L6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHFQ7M4L6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHFQ7M4L6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHFQ7M4L6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.77■□□□□ 0.44
SHFQ7M4L6 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHFQ7M4L6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SHFQ7M4L6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.77■□□□□ 0.44
SHFQ7M4L6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHFQ7M4L6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHFQ7M4L6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.77■□□□□ 0.44
SHFQ7M4L6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHFQ7M4L6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SHFQ7M4L6 CYP21A1P-202ENST00000354927 1481 ntBASIC17.77■□□□□ 0.44
SHFQ7M4L6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHFQ7M4L6 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHFQ7M4L6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHFQ7M4L6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SHFQ7M4L6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SHFQ7M4L6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.77■□□□□ 0.44
SHFQ7M4L6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SHFQ7M4L6 AC007322.4-201ENST00000509611 723 ntBASIC17.77■□□□□ 0.44
SHFQ7M4L6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SHFQ7M4L6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.77■□□□□ 0.44
SHFQ7M4L6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.77■□□□□ 0.44
SHFQ7M4L6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.77■□□□□ 0.44
SHFQ7M4L6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.77■□□□□ 0.44
SHFQ7M4L6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
SHFQ7M4L6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SHFQ7M4L6 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.77■□□□□ 0.44
SHFQ7M4L6 AC013268.1-206ENST00000638368 961 ntBASIC17.77■□□□□ 0.44
SHFQ7M4L6 AC112229.1-201ENST00000639295 961 ntBASIC17.77■□□□□ 0.44
SHFQ7M4L6 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHFQ7M4L6 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SHFQ7M4L6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHFQ7M4L6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHFQ7M4L6 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHFQ7M4L6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHFQ7M4L6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHFQ7M4L6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SHFQ7M4L6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.77■□□□□ 0.43
SHFQ7M4L6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
SHFQ7M4L6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHFQ7M4L6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHFQ7M4L6 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.77■□□□□ 0.43
SHFQ7M4L6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
SHFQ7M4L6 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHFQ7M4L6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.76■□□□□ 0.43
SHFQ7M4L6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
SHFQ7M4L6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.76■□□□□ 0.43
SHFQ7M4L6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.76■□□□□ 0.43
SHFQ7M4L6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHFQ7M4L6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHFQ7M4L6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHFQ7M4L6 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SHFQ7M4L6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SHFQ7M4L6 AC009237.14-201ENST00000609975 1594 ntBASIC17.76■□□□□ 0.43
SHFQ7M4L6 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.76■□□□□ 0.43
SHFQ7M4L6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHFQ7M4L6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHFQ7M4L6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHFQ7M4L6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHFQ7M4L6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.76■□□□□ 0.43
SHFQ7M4L6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.76■□□□□ 0.43
SHFQ7M4L6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHFQ7M4L6 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.76■□□□□ 0.43
SHFQ7M4L6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
SHFQ7M4L6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
SHFQ7M4L6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHFQ7M4L6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.76■□□□□ 0.43
SHFQ7M4L6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.76■□□□□ 0.43
SHFQ7M4L6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHFQ7M4L6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.76■□□□□ 0.43
SHFQ7M4L6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHFQ7M4L6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHFQ7M4L6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHFQ7M4L6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHFQ7M4L6 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHFQ7M4L6 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SHFQ7M4L6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SHFQ7M4L6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHFQ7M4L6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHFQ7M4L6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHFQ7M4L6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.75■□□□□ 0.43
SHFQ7M4L6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.75■□□□□ 0.43
SHFQ7M4L6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.75■□□□□ 0.43
SHFQ7M4L6 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.75■□□□□ 0.43
SHFQ7M4L6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.75■□□□□ 0.43
SHFQ7M4L6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SHFQ7M4L6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SHFQ7M4L6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHFQ7M4L6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHFQ7M4L6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHFQ7M4L6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHFQ7M4L6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms