Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC15.28■□□□□ 0.04
KCNIP4Q6PIL6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
KCNIP4Q6PIL6 OR2A1-AS1-204ENST00000470435 602 ntBASIC15.28■□□□□ 0.04
KCNIP4Q6PIL6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC15.28■□□□□ 0.04
KCNIP4Q6PIL6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC15.28■□□□□ 0.04
KCNIP4Q6PIL6 TRIR-205ENST00000592273 783 ntTSL 3 BASIC15.28■□□□□ 0.04
KCNIP4Q6PIL6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KCNIP4Q6PIL6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
KCNIP4Q6PIL6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KCNIP4Q6PIL6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.28■□□□□ 0.04
KCNIP4Q6PIL6 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
KCNIP4Q6PIL6 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KCNIP4Q6PIL6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KCNIP4Q6PIL6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KCNIP4Q6PIL6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KCNIP4Q6PIL6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
KCNIP4Q6PIL6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
KCNIP4Q6PIL6 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KCNIP4Q6PIL6 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
KCNIP4Q6PIL6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC15.27■□□□□ 0.04
KCNIP4Q6PIL6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KCNIP4Q6PIL6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KCNIP4Q6PIL6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC15.27■□□□□ 0.04
KCNIP4Q6PIL6 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
KCNIP4Q6PIL6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.27■□□□□ 0.04
KCNIP4Q6PIL6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KCNIP4Q6PIL6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KCNIP4Q6PIL6 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
KCNIP4Q6PIL6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KCNIP4Q6PIL6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KCNIP4Q6PIL6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
KCNIP4Q6PIL6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC15.27■□□□□ 0.04
KCNIP4Q6PIL6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC15.27■□□□□ 0.04
KCNIP4Q6PIL6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.27■□□□□ 0.03
KCNIP4Q6PIL6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
KCNIP4Q6PIL6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
KCNIP4Q6PIL6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
KCNIP4Q6PIL6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
KCNIP4Q6PIL6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
KCNIP4Q6PIL6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
KCNIP4Q6PIL6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
KCNIP4Q6PIL6 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
KCNIP4Q6PIL6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KCNIP4Q6PIL6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
KCNIP4Q6PIL6 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
KCNIP4Q6PIL6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
KCNIP4Q6PIL6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.27■□□□□ 0.03
KCNIP4Q6PIL6 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP4Q6PIL6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.26■□□□□ 0.03
KCNIP4Q6PIL6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
KCNIP4Q6PIL6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.26■□□□□ 0.03
KCNIP4Q6PIL6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP4Q6PIL6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP4Q6PIL6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP4Q6PIL6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
KCNIP4Q6PIL6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC15.26■□□□□ 0.03
KCNIP4Q6PIL6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.26■□□□□ 0.03
KCNIP4Q6PIL6 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP4Q6PIL6 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP4Q6PIL6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC15.26■□□□□ 0.03
KCNIP4Q6PIL6 AL117332.1-201ENST00000622628 974 ntBASIC15.26■□□□□ 0.03
KCNIP4Q6PIL6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP4Q6PIL6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP4Q6PIL6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.26■□□□□ 0.03
KCNIP4Q6PIL6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP4Q6PIL6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP4Q6PIL6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
KCNIP4Q6PIL6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP4Q6PIL6 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
KCNIP4Q6PIL6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP4Q6PIL6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC15.26■□□□□ 0.03
KCNIP4Q6PIL6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
KCNIP4Q6PIL6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP4Q6PIL6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.26■□□□□ 0.03
KCNIP4Q6PIL6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
KCNIP4Q6PIL6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP4Q6PIL6 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP4Q6PIL6 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 GRAMD4P7-201ENST00000578182 1232 ntBASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms