Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC22.42■■□□□ 1.18
PPP4R3AQ6IN85 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PPP4R3AQ6IN85 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC22.42■■□□□ 1.18
PPP4R3AQ6IN85 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PPP4R3AQ6IN85 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC22.42■■□□□ 1.18
PPP4R3AQ6IN85 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC22.41■■□□□ 1.18
PPP4R3AQ6IN85 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
PPP4R3AQ6IN85 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R3AQ6IN85 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R3AQ6IN85 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R3AQ6IN85 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R3AQ6IN85 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R3AQ6IN85 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R3AQ6IN85 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R3AQ6IN85 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R3AQ6IN85 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.41■■□□□ 1.18
PPP4R3AQ6IN85 PNN-205ENST00000556530 601 ntTSL 2 BASIC22.41■■□□□ 1.18
PPP4R3AQ6IN85 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC22.41■■□□□ 1.18
PPP4R3AQ6IN85 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC22.41■■□□□ 1.18
PPP4R3AQ6IN85 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22.41■■□□□ 1.18
PPP4R3AQ6IN85 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC22.41■■□□□ 1.18
PPP4R3AQ6IN85 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R3AQ6IN85 LBX2-AS1-202ENST00000603175 2083 ntBASIC22.41■■□□□ 1.18
PPP4R3AQ6IN85 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC22.41■■□□□ 1.18
PPP4R3AQ6IN85 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R3AQ6IN85 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R3AQ6IN85 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R3AQ6IN85 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.4■■□□□ 1.18
PPP4R3AQ6IN85 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R3AQ6IN85 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R3AQ6IN85 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R3AQ6IN85 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R3AQ6IN85 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC22.4■■□□□ 1.18
PPP4R3AQ6IN85 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
PPP4R3AQ6IN85 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R3AQ6IN85 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
PPP4R3AQ6IN85 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.4■■□□□ 1.18
PPP4R3AQ6IN85 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R3AQ6IN85 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC22.4■■□□□ 1.18
PPP4R3AQ6IN85 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC22.4■■□□□ 1.18
PPP4R3AQ6IN85 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R3AQ6IN85 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R3AQ6IN85 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R3AQ6IN85 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R3AQ6IN85 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R3AQ6IN85 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
PPP4R3AQ6IN85 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.39■■□□□ 1.18
PPP4R3AQ6IN85 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PPP4R3AQ6IN85 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.39■■□□□ 1.17
PPP4R3AQ6IN85 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PPP4R3AQ6IN85 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PPP4R3AQ6IN85 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PPP4R3AQ6IN85 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
PPP4R3AQ6IN85 KRT18P29-201ENST00000397031 1267 ntBASIC22.39■■□□□ 1.17
PPP4R3AQ6IN85 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
PPP4R3AQ6IN85 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PPP4R3AQ6IN85 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC22.39■■□□□ 1.17
PPP4R3AQ6IN85 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22.39■■□□□ 1.17
PPP4R3AQ6IN85 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC22.39■■□□□ 1.17
PPP4R3AQ6IN85 IRX5-204ENST00000560154 879 ntTSL 5 BASIC22.39■■□□□ 1.17
PPP4R3AQ6IN85 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PPP4R3AQ6IN85 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PPP4R3AQ6IN85 STX6-204ENST00000542060 4809 ntTSL 2 BASIC22.39■■□□□ 1.17
PPP4R3AQ6IN85 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
PPP4R3AQ6IN85 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PPP4R3AQ6IN85 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
PPP4R3AQ6IN85 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
PPP4R3AQ6IN85 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
PPP4R3AQ6IN85 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
PPP4R3AQ6IN85 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
PPP4R3AQ6IN85 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PPP4R3AQ6IN85 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
PPP4R3AQ6IN85 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
PPP4R3AQ6IN85 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
PPP4R3AQ6IN85 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PPP4R3AQ6IN85 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC22.38■■□□□ 1.17
PPP4R3AQ6IN85 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PPP4R3AQ6IN85 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PPP4R3AQ6IN85 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC22.38■■□□□ 1.17
PPP4R3AQ6IN85 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
PPP4R3AQ6IN85 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC22.38■■□□□ 1.17
PPP4R3AQ6IN85 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.38■■□□□ 1.17
PPP4R3AQ6IN85 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.38■■□□□ 1.17
PPP4R3AQ6IN85 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PPP4R3AQ6IN85 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.38■■□□□ 1.17
PPP4R3AQ6IN85 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
PPP4R3AQ6IN85 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC22.38■■□□□ 1.17
PPP4R3AQ6IN85 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC22.38■■□□□ 1.17
PPP4R3AQ6IN85 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PPP4R3AQ6IN85 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PPP4R3AQ6IN85 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC22.38■■□□□ 1.17
PPP4R3AQ6IN85 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
PPP4R3AQ6IN85 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC22.38■■□□□ 1.17
PPP4R3AQ6IN85 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PPP4R3AQ6IN85 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC22.37■■□□□ 1.17
PPP4R3AQ6IN85 ME2-218ENST00000640965 2476 ntTSL 5 BASIC22.37■■□□□ 1.17
PPP4R3AQ6IN85 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PPP4R3AQ6IN85 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC22.37■■□□□ 1.17
PPP4R3AQ6IN85 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC22.37■■□□□ 1.17
PPP4R3AQ6IN85 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms