Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.45■□□□□ 0.7
CTSL3PQ5NE16 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CTSL3PQ5NE16 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTSL3PQ5NE16 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.45■□□□□ 0.7
CTSL3PQ5NE16 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CTSL3PQ5NE16 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTSL3PQ5NE16 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTSL3PQ5NE16 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTSL3PQ5NE16 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTSL3PQ5NE16 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTSL3PQ5NE16 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.44■□□□□ 0.7
CTSL3PQ5NE16 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTSL3PQ5NE16 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTSL3PQ5NE16 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTSL3PQ5NE16 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTSL3PQ5NE16 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CTSL3PQ5NE16 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTSL3PQ5NE16 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.44■□□□□ 0.7
CTSL3PQ5NE16 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.44■□□□□ 0.7
CTSL3PQ5NE16 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.44■□□□□ 0.7
CTSL3PQ5NE16 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTSL3PQ5NE16 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.44■□□□□ 0.7
CTSL3PQ5NE16 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.44■□□□□ 0.7
CTSL3PQ5NE16 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.44■□□□□ 0.7
CTSL3PQ5NE16 UNC93B4-201ENST00000505679 747 ntBASIC19.44■□□□□ 0.7
CTSL3PQ5NE16 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.44■□□□□ 0.7
CTSL3PQ5NE16 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.44■□□□□ 0.7
CTSL3PQ5NE16 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.44■□□□□ 0.7
CTSL3PQ5NE16 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTSL3PQ5NE16 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.44■□□□□ 0.7
CTSL3PQ5NE16 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTSL3PQ5NE16 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTSL3PQ5NE16 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.44■□□□□ 0.7
CTSL3PQ5NE16 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTSL3PQ5NE16 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTSL3PQ5NE16 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.43■□□□□ 0.7
CTSL3PQ5NE16 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTSL3PQ5NE16 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTSL3PQ5NE16 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CTSL3PQ5NE16 AC116562.4-201ENST00000641316 2276 ntBASIC19.43■□□□□ 0.7
CTSL3PQ5NE16 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTSL3PQ5NE16 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTSL3PQ5NE16 RNA5SP413-201ENST00000516373 109 ntBASIC19.43■□□□□ 0.7
CTSL3PQ5NE16 AC008403.3-201ENST00000598924 454 ntBASIC19.43■□□□□ 0.7
CTSL3PQ5NE16 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CTSL3PQ5NE16 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTSL3PQ5NE16 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTSL3PQ5NE16 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTSL3PQ5NE16 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CTSL3PQ5NE16 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.43■□□□□ 0.7
CTSL3PQ5NE16 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.43■□□□□ 0.7
CTSL3PQ5NE16 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTSL3PQ5NE16 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CTSL3PQ5NE16 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.42■□□□□ 0.7
CTSL3PQ5NE16 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.42■□□□□ 0.7
CTSL3PQ5NE16 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CTSL3PQ5NE16 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTSL3PQ5NE16 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CTSL3PQ5NE16 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.42■□□□□ 0.7
CTSL3PQ5NE16 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CTSL3PQ5NE16 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.42■□□□□ 0.7
CTSL3PQ5NE16 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.42■□□□□ 0.7
CTSL3PQ5NE16 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CTSL3PQ5NE16 AL121906.2-201ENST00000621597 723 ntBASIC19.42■□□□□ 0.7
CTSL3PQ5NE16 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.42■□□□□ 0.7
CTSL3PQ5NE16 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTSL3PQ5NE16 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTSL3PQ5NE16 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTSL3PQ5NE16 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSL3PQ5NE16 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.41■□□□□ 0.7
CTSL3PQ5NE16 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
CTSL3PQ5NE16 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSL3PQ5NE16 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.41■□□□□ 0.7
CTSL3PQ5NE16 KRT18P6-201ENST00000555540 1265 ntBASIC19.41■□□□□ 0.7
CTSL3PQ5NE16 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.41■□□□□ 0.7
CTSL3PQ5NE16 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.41■□□□□ 0.7
CTSL3PQ5NE16 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSL3PQ5NE16 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CTSL3PQ5NE16 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CTSL3PQ5NE16 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSL3PQ5NE16 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.41■□□□□ 0.7
CTSL3PQ5NE16 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.41■□□□□ 0.7
CTSL3PQ5NE16 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.4■□□□□ 0.7
CTSL3PQ5NE16 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTSL3PQ5NE16 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTSL3PQ5NE16 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.4■□□□□ 0.7
CTSL3PQ5NE16 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTSL3PQ5NE16 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTSL3PQ5NE16 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.4■□□□□ 0.7
CTSL3PQ5NE16 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.4■□□□□ 0.7
CTSL3PQ5NE16 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTSL3PQ5NE16 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.4■□□□□ 0.7
CTSL3PQ5NE16 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.4■□□□□ 0.7
CTSL3PQ5NE16 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTSL3PQ5NE16 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.4■□□□□ 0.7
CTSL3PQ5NE16 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.4■□□□□ 0.7
CTSL3PQ5NE16 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.4■□□□□ 0.7
CTSL3PQ5NE16 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.4■□□□□ 0.7
CTSL3PQ5NE16 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTSL3PQ5NE16 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms