Protein–RNA interactions for Protein: Q4V339

CBWD6, COBW domain-containing protein 6, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6Q4V339 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.32■■□□□ 1
CBWD6Q4V339 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CBWD6Q4V339 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.32■■□□□ 1
CBWD6Q4V339 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.32■■□□□ 1
CBWD6Q4V339 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CBWD6Q4V339 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.32■■□□□ 1
CBWD6Q4V339 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.32■■□□□ 1
CBWD6Q4V339 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.32■■□□□ 1
CBWD6Q4V339 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CBWD6Q4V339 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.32■■□□□ 1
CBWD6Q4V339 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
CBWD6Q4V339 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.32■■□□□ 1
CBWD6Q4V339 UNC93B5-201ENST00000530315 699 ntBASIC21.32■■□□□ 1
CBWD6Q4V339 AC008687.6-201ENST00000596318 630 ntBASIC21.32■■□□□ 1
CBWD6Q4V339 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.32■■□□□ 1
CBWD6Q4V339 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CBWD6Q4V339 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CBWD6Q4V339 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CBWD6Q4V339 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.32■■□□□ 1
CBWD6Q4V339 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CBWD6Q4V339 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CBWD6Q4V339 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CBWD6Q4V339 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.31■■□□□ 1
CBWD6Q4V339 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CBWD6Q4V339 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.31■■□□□ 1
CBWD6Q4V339 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CBWD6Q4V339 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CBWD6Q4V339 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CBWD6Q4V339 UNC93B4-201ENST00000505679 747 ntBASIC21.31■■□□□ 1
CBWD6Q4V339 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.31■■□□□ 1
CBWD6Q4V339 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.31■■□□□ 1
CBWD6Q4V339 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.31■■□□□ 1
CBWD6Q4V339 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CBWD6Q4V339 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CBWD6Q4V339 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CBWD6Q4V339 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.31■■□□□ 1
CBWD6Q4V339 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.31■■□□□ 1
CBWD6Q4V339 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.31■■□□□ 1
CBWD6Q4V339 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
CBWD6Q4V339 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CBWD6Q4V339 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CBWD6Q4V339 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.3■■□□□ 1
CBWD6Q4V339 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CBWD6Q4V339 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.3■■□□□ 1
CBWD6Q4V339 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.3■■□□□ 1
CBWD6Q4V339 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.3■■□□□ 1
CBWD6Q4V339 RNA5SP413-201ENST00000516373 109 ntBASIC21.3■■□□□ 1
CBWD6Q4V339 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.3■■□□□ 1
CBWD6Q4V339 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.3■■□□□ 1
CBWD6Q4V339 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.3■■□□□ 1
CBWD6Q4V339 AC008403.3-201ENST00000598924 454 ntBASIC21.3■■□□□ 1
CBWD6Q4V339 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CBWD6Q4V339 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.3■■□□□ 1
CBWD6Q4V339 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.3■■□□□ 1
CBWD6Q4V339 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CBWD6Q4V339 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CBWD6Q4V339 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.29■■□□□ 1
CBWD6Q4V339 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CBWD6Q4V339 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CBWD6Q4V339 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CBWD6Q4V339 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CBWD6Q4V339 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.29■■□□□ 1
CBWD6Q4V339 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CBWD6Q4V339 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CBWD6Q4V339 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.29■■□□□ 1
CBWD6Q4V339 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.29■■□□□ 1
CBWD6Q4V339 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.29■■□□□ 1
CBWD6Q4V339 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.29■■□□□ 1
CBWD6Q4V339 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
CBWD6Q4V339 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.29■■□□□ 1
CBWD6Q4V339 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.29■■□□□ 1
CBWD6Q4V339 AC093484.2-201ENST00000580996 2166 ntBASIC21.29■■□□□ 1
CBWD6Q4V339 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
CBWD6Q4V339 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CBWD6Q4V339 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.28■■□□□ 1
CBWD6Q4V339 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.28■■□□□ 1
CBWD6Q4V339 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CBWD6Q4V339 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CBWD6Q4V339 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CBWD6Q4V339 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.28■■□□□ 1
CBWD6Q4V339 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.28■■□□□ 1
CBWD6Q4V339 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
CBWD6Q4V339 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.28■■□□□ 1
CBWD6Q4V339 KRT18P6-201ENST00000555540 1265 ntBASIC21.28■■□□□ 1
CBWD6Q4V339 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.28■■□□□ 1
CBWD6Q4V339 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.28■■□□□ 1
CBWD6Q4V339 AC007952.6-201ENST00000573168 2673 ntBASIC21.28■■□□□ 1
CBWD6Q4V339 AC003957.1-201ENST00000625108 2673 ntBASIC21.28■■□□□ 1
CBWD6Q4V339 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.28■■□□□ 1
CBWD6Q4V339 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CBWD6Q4V339 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.27■■□□□ 1
CBWD6Q4V339 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CBWD6Q4V339 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CBWD6Q4V339 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.27■■□□□ 1
CBWD6Q4V339 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.27■■□□□ 1
CBWD6Q4V339 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CBWD6Q4V339 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.27■■□□□ 1
CBWD6Q4V339 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.27■■□□□ 1
CBWD6Q4V339 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CBWD6Q4V339 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms