Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CDH17Q12864 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CDH17Q12864 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.93■□□□□ 0.78
CDH17Q12864 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH17Q12864 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.92■□□□□ 0.78
CDH17Q12864 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.92■□□□□ 0.78
CDH17Q12864 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.92■□□□□ 0.78
CDH17Q12864 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.92■□□□□ 0.78
CDH17Q12864 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CDH17Q12864 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
CDH17Q12864 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.92■□□□□ 0.78
CDH17Q12864 AL109923.1-201ENST00000618799 583 ntBASIC19.92■□□□□ 0.78
CDH17Q12864 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.92■□□□□ 0.78
CDH17Q12864 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
CDH17Q12864 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH17Q12864 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CDH17Q12864 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CDH17Q12864 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH17Q12864 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH17Q12864 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CDH17Q12864 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.91■□□□□ 0.78
CDH17Q12864 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.91■□□□□ 0.78
CDH17Q12864 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH17Q12864 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH17Q12864 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH17Q12864 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH17Q12864 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.91■□□□□ 0.78
CDH17Q12864 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH17Q12864 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.91■□□□□ 0.78
CDH17Q12864 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.91■□□□□ 0.78
CDH17Q12864 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.91■□□□□ 0.78
CDH17Q12864 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.91■□□□□ 0.78
CDH17Q12864 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.91■□□□□ 0.78
CDH17Q12864 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.91■□□□□ 0.78
CDH17Q12864 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH17Q12864 HLA-B-256ENST00000639848 1089 ntBASIC19.91■□□□□ 0.78
CDH17Q12864 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH17Q12864 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.91■□□□□ 0.78
CDH17Q12864 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH17Q12864 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH17Q12864 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH17Q12864 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH17Q12864 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH17Q12864 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.91■□□□□ 0.78
CDH17Q12864 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDH17Q12864 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH17Q12864 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH17Q12864 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH17Q12864 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH17Q12864 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH17Q12864 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.9■□□□□ 0.78
CDH17Q12864 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH17Q12864 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
CDH17Q12864 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH17Q12864 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH17Q12864 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH17Q12864 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH17Q12864 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH17Q12864 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDH17Q12864 AL138781.1-201ENST00000566567 1274 ntBASIC19.9■□□□□ 0.78
CDH17Q12864 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.9■□□□□ 0.78
CDH17Q12864 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.9■□□□□ 0.78
CDH17Q12864 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CDH17Q12864 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDH17Q12864 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDH17Q12864 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CDH17Q12864 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH17Q12864 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.9■□□□□ 0.78
CDH17Q12864 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH17Q12864 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.9■□□□□ 0.78
CDH17Q12864 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH17Q12864 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CDH17Q12864 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.78
CDH17Q12864 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH17Q12864 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH17Q12864 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDH17Q12864 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH17Q12864 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH17Q12864 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH17Q12864 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDH17Q12864 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.89■□□□□ 0.77
CDH17Q12864 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH17Q12864 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.89■□□□□ 0.77
CDH17Q12864 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH17Q12864 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CDH17Q12864 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.89■□□□□ 0.77
CDH17Q12864 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
CDH17Q12864 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH17Q12864 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.89■□□□□ 0.77
CDH17Q12864 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.89■□□□□ 0.77
CDH17Q12864 AC092368.3-202ENST00000574180 1591 ntBASIC19.89■□□□□ 0.77
CDH17Q12864 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.89■□□□□ 0.77
CDH17Q12864 AC093484.2-201ENST00000580996 2166 ntBASIC19.89■□□□□ 0.77
CDH17Q12864 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CDH17Q12864 AC006557.6-201ENST00000623071 864 ntBASIC19.89■□□□□ 0.77
CDH17Q12864 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CDH17Q12864 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH17Q12864 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDH17Q12864 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH17Q12864 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms