Protein–RNA interactions for Protein: P84550

SKOR1, SKI family transcriptional corepressor 1, humanhuman

Predictions only

Length 965 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKOR1P84550 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SKOR1P84550 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.65■□□□□ 0.9
SKOR1P84550 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.65■□□□□ 0.9
SKOR1P84550 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.65■□□□□ 0.9
SKOR1P84550 TSPY20P-201ENST00000450910 630 ntBASIC20.65■□□□□ 0.9
SKOR1P84550 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.65■□□□□ 0.9
SKOR1P84550 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.65■□□□□ 0.9
SKOR1P84550 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SKOR1P84550 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SKOR1P84550 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SKOR1P84550 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.9
SKOR1P84550 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.64■□□□□ 0.9
SKOR1P84550 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.64■□□□□ 0.9
SKOR1P84550 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SKOR1P84550 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SKOR1P84550 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SKOR1P84550 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SKOR1P84550 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SKOR1P84550 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SKOR1P84550 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SKOR1P84550 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SKOR1P84550 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SKOR1P84550 MCRIP2P1-201ENST00000394346 511 ntBASIC20.64■□□□□ 0.89
SKOR1P84550 AL512625.2-201ENST00000417533 625 ntBASIC20.64■□□□□ 0.89
SKOR1P84550 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.64■□□□□ 0.89
SKOR1P84550 KRT18P6-201ENST00000555540 1265 ntBASIC20.64■□□□□ 0.89
SKOR1P84550 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.64■□□□□ 0.89
SKOR1P84550 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
SKOR1P84550 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SKOR1P84550 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SKOR1P84550 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SKOR1P84550 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
SKOR1P84550 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
SKOR1P84550 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.63■□□□□ 0.89
SKOR1P84550 AC010980.2-201ENST00000587099 1412 ntBASIC20.63■□□□□ 0.89
SKOR1P84550 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SKOR1P84550 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SKOR1P84550 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.63■□□□□ 0.89
SKOR1P84550 AC083906.2-201ENST00000511578 360 ntBASIC20.63■□□□□ 0.89
SKOR1P84550 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SKOR1P84550 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SKOR1P84550 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SKOR1P84550 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SKOR1P84550 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SKOR1P84550 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SKOR1P84550 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.63■□□□□ 0.89
SKOR1P84550 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.63■□□□□ 0.89
SKOR1P84550 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
SKOR1P84550 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
SKOR1P84550 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
SKOR1P84550 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SKOR1P84550 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.62■□□□□ 0.89
SKOR1P84550 Z82202.1-201ENST00000623446 1880 ntBASIC20.62■□□□□ 0.89
SKOR1P84550 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.62■□□□□ 0.89
SKOR1P84550 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SKOR1P84550 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SKOR1P84550 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.62■□□□□ 0.89
SKOR1P84550 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.62■□□□□ 0.89
SKOR1P84550 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.62■□□□□ 0.89
SKOR1P84550 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SKOR1P84550 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SKOR1P84550 AL355472.2-201ENST00000422958 438 ntBASIC20.62■□□□□ 0.89
SKOR1P84550 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SKOR1P84550 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SKOR1P84550 CYP2T3P-201ENST00000601990 817 ntBASIC20.62■□□□□ 0.89
SKOR1P84550 AL356652.1-201ENST00000615962 565 ntBASIC20.62■□□□□ 0.89
SKOR1P84550 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SKOR1P84550 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SKOR1P84550 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SKOR1P84550 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SKOR1P84550 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
SKOR1P84550 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SKOR1P84550 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.62■□□□□ 0.89
SKOR1P84550 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SKOR1P84550 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SKOR1P84550 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SKOR1P84550 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SKOR1P84550 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SKOR1P84550 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SKOR1P84550 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SKOR1P84550 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
SKOR1P84550 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SKOR1P84550 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SKOR1P84550 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SKOR1P84550 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
SKOR1P84550 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SKOR1P84550 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.61■□□□□ 0.89
SKOR1P84550 AF201337.1-201ENST00000520239 748 ntBASIC20.61■□□□□ 0.89
SKOR1P84550 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.61■□□□□ 0.89
SKOR1P84550 AC105036.2-201ENST00000569468 176 ntBASIC20.61■□□□□ 0.89
SKOR1P84550 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.61■□□□□ 0.89
SKOR1P84550 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.61■□□□□ 0.89
SKOR1P84550 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
SKOR1P84550 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SKOR1P84550 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SKOR1P84550 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SKOR1P84550 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SKOR1P84550 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SKOR1P84550 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SKOR1P84550 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms