Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.72■□□□□ 0.59
RAE1P78406 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RAE1P78406 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.72■□□□□ 0.59
RAE1P78406 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.72■□□□□ 0.59
RAE1P78406 AC104771.1-201ENST00000603335 964 ntBASIC18.72■□□□□ 0.59
RAE1P78406 HLA-B-256ENST00000639848 1089 ntBASIC18.72■□□□□ 0.59
RAE1P78406 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAE1P78406 AC092368.3-202ENST00000574180 1591 ntBASIC18.72■□□□□ 0.59
RAE1P78406 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.72■□□□□ 0.59
RAE1P78406 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
RAE1P78406 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAE1P78406 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAE1P78406 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAE1P78406 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RAE1P78406 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
RAE1P78406 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAE1P78406 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAE1P78406 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAE1P78406 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAE1P78406 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RAE1P78406 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.71■□□□□ 0.59
RAE1P78406 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.71■□□□□ 0.59
RAE1P78406 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
RAE1P78406 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAE1P78406 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAE1P78406 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAE1P78406 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAE1P78406 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAE1P78406 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAE1P78406 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RAE1P78406 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAE1P78406 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RAE1P78406 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAE1P78406 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
RAE1P78406 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAE1P78406 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.7■□□□□ 0.58
RAE1P78406 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAE1P78406 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.7■□□□□ 0.58
RAE1P78406 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAE1P78406 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAE1P78406 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAE1P78406 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAE1P78406 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.7■□□□□ 0.58
RAE1P78406 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.7■□□□□ 0.58
RAE1P78406 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAE1P78406 RPS2P52-201ENST00000469610 820 ntBASIC18.7■□□□□ 0.58
RAE1P78406 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAE1P78406 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.7■□□□□ 0.58
RAE1P78406 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.7■□□□□ 0.58
RAE1P78406 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAE1P78406 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAE1P78406 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAE1P78406 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAE1P78406 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RAE1P78406 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAE1P78406 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAE1P78406 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAE1P78406 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RAE1P78406 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAE1P78406 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.69■□□□□ 0.58
RAE1P78406 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.69■□□□□ 0.58
RAE1P78406 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAE1P78406 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAE1P78406 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAE1P78406 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAE1P78406 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAE1P78406 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.69■□□□□ 0.58
RAE1P78406 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAE1P78406 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.69■□□□□ 0.58
RAE1P78406 AC069152.1-201ENST00000438030 544 ntBASIC18.69■□□□□ 0.58
RAE1P78406 PNMA6B-201ENST00000538162 1200 ntBASIC18.69■□□□□ 0.58
RAE1P78406 AC142086.2-201ENST00000569753 217 ntBASIC18.69■□□□□ 0.58
RAE1P78406 AC060766.5-201ENST00000590539 871 ntBASIC18.69■□□□□ 0.58
RAE1P78406 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAE1P78406 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.69■□□□□ 0.58
RAE1P78406 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAE1P78406 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAE1P78406 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.69■□□□□ 0.58
RAE1P78406 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAE1P78406 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.68■□□□□ 0.58
RAE1P78406 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.68■□□□□ 0.58
RAE1P78406 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.68■□□□□ 0.58
RAE1P78406 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAE1P78406 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAE1P78406 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAE1P78406 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAE1P78406 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAE1P78406 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RAE1P78406 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAE1P78406 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.68■□□□□ 0.58
RAE1P78406 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.68■□□□□ 0.58
RAE1P78406 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.68■□□□□ 0.58
RAE1P78406 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.68■□□□□ 0.58
RAE1P78406 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.68■□□□□ 0.58
RAE1P78406 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAE1P78406 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.68■□□□□ 0.58
RAE1P78406 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAE1P78406 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.68■□□□□ 0.58
RAE1P78406 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAE1P78406 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms