Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.06■□□□□ 0.48
CLDN20P56880 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
CLDN20P56880 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN20P56880 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CLDN20P56880 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN20P56880 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN20P56880 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
CLDN20P56880 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.05■□□□□ 0.48
CLDN20P56880 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN20P56880 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN20P56880 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN20P56880 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN20P56880 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN20P56880 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN20P56880 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN20P56880 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.05■□□□□ 0.48
CLDN20P56880 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CLDN20P56880 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.05■□□□□ 0.48
CLDN20P56880 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.05■□□□□ 0.48
CLDN20P56880 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.05■□□□□ 0.48
CLDN20P56880 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.05■□□□□ 0.48
CLDN20P56880 ITM2C-210ENST00000620962 501 ntBASIC18.05■□□□□ 0.48
CLDN20P56880 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.05■□□□□ 0.48
CLDN20P56880 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN20P56880 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.05■□□□□ 0.48
CLDN20P56880 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN20P56880 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN20P56880 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.05■□□□□ 0.48
CLDN20P56880 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN20P56880 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN20P56880 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN20P56880 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.05■□□□□ 0.48
CLDN20P56880 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CLDN20P56880 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN20P56880 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
CLDN20P56880 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN20P56880 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN20P56880 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN20P56880 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN20P56880 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CLDN20P56880 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN20P56880 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN20P56880 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN20P56880 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN20P56880 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN20P56880 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN20P56880 KRT18P29-201ENST00000397031 1267 ntBASIC18.04■□□□□ 0.48
CLDN20P56880 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CLDN20P56880 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.04■□□□□ 0.48
CLDN20P56880 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
CLDN20P56880 AC128676.1-201ENST00000454392 318 ntBASIC18.04■□□□□ 0.48
CLDN20P56880 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN20P56880 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.04■□□□□ 0.48
CLDN20P56880 TMEM191A-211ENST00000637163 1067 ntBASIC18.04■□□□□ 0.48
CLDN20P56880 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN20P56880 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN20P56880 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CLDN20P56880 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN20P56880 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN20P56880 AC020907.5-201ENST00000624372 1936 ntBASIC18.04■□□□□ 0.48
CLDN20P56880 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN20P56880 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN20P56880 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN20P56880 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
CLDN20P56880 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN20P56880 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CLDN20P56880 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN20P56880 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN20P56880 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN20P56880 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.03■□□□□ 0.48
CLDN20P56880 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN20P56880 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.03■□□□□ 0.48
CLDN20P56880 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CLDN20P56880 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.03■□□□□ 0.48
CLDN20P56880 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDN20P56880 AC008687.6-201ENST00000596318 630 ntBASIC18.03■□□□□ 0.48
CLDN20P56880 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN20P56880 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN20P56880 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN20P56880 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDN20P56880 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN20P56880 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN20P56880 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN20P56880 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN20P56880 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN20P56880 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CLDN20P56880 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN20P56880 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CLDN20P56880 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.02■□□□□ 0.48
CLDN20P56880 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN20P56880 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN20P56880 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN20P56880 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.02■□□□□ 0.48
CLDN20P56880 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN20P56880 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN20P56880 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN20P56880 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN20P56880 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN20P56880 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
CLDN20P56880 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms