Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.13■□□□□ 0.33
CLDN12P56749 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN12P56749 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.13■□□□□ 0.33
CLDN12P56749 CDV3P1-201ENST00000471403 739 ntBASIC17.13■□□□□ 0.33
CLDN12P56749 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.13■□□□□ 0.33
CLDN12P56749 KRT18P20-201ENST00000548986 1279 ntBASIC17.13■□□□□ 0.33
CLDN12P56749 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN12P56749 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN12P56749 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN12P56749 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN12P56749 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN12P56749 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN12P56749 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN12P56749 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN12P56749 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN12P56749 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN12P56749 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN12P56749 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN12P56749 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN12P56749 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN12P56749 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN12P56749 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN12P56749 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN12P56749 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLDN12P56749 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN12P56749 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CLDN12P56749 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN12P56749 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN12P56749 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN12P56749 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN12P56749 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN12P56749 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN12P56749 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN12P56749 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN12P56749 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN12P56749 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN12P56749 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN12P56749 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
CLDN12P56749 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN12P56749 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN12P56749 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN12P56749 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CLDN12P56749 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN12P56749 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN12P56749 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN12P56749 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN12P56749 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN12P56749 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN12P56749 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN12P56749 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN12P56749 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN12P56749 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN12P56749 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.11■□□□□ 0.33
CLDN12P56749 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.11■□□□□ 0.33
CLDN12P56749 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN12P56749 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN12P56749 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN12P56749 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN12P56749 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN12P56749 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN12P56749 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLDN12P56749 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN12P56749 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN12P56749 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN12P56749 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN12P56749 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN12P56749 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN12P56749 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDN12P56749 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN12P56749 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN12P56749 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN12P56749 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN12P56749 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN12P56749 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN12P56749 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN12P56749 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN12P56749 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN12P56749 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN12P56749 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN12P56749 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN12P56749 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDN12P56749 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLDN12P56749 AC019069.1-201ENST00000610008 1333 ntBASIC17.1■□□□□ 0.33
CLDN12P56749 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN12P56749 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN12P56749 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.1■□□□□ 0.33
CLDN12P56749 LINC02228-203ENST00000641970 1355 ntBASIC17.1■□□□□ 0.33
CLDN12P56749 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN12P56749 AC087633.2-202ENST00000565166 1439 ntBASIC17.1■□□□□ 0.33
CLDN12P56749 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN12P56749 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN12P56749 PTBP1P-201ENST00000554374 1601 ntBASIC17.1■□□□□ 0.33
CLDN12P56749 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN12P56749 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN12P56749 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN12P56749 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN12P56749 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN12P56749 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN12P56749 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN12P56749 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms