Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.96■□□□□ 0.63
CLDN6P56747 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN6P56747 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN6P56747 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN6P56747 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN6P56747 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN6P56747 AP006587.1-201ENST00000534129 1502 ntBASIC18.96■□□□□ 0.63
CLDN6P56747 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN6P56747 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.96■□□□□ 0.63
CLDN6P56747 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
CLDN6P56747 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN6P56747 TSPY14P-201ENST00000303979 915 ntBASIC18.96■□□□□ 0.63
CLDN6P56747 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN6P56747 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN6P56747 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.96■□□□□ 0.63
CLDN6P56747 AP005242.2-201ENST00000580065 1175 ntBASIC18.96■□□□□ 0.63
CLDN6P56747 AC139887.4-201ENST00000607877 719 ntBASIC18.96■□□□□ 0.63
CLDN6P56747 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN6P56747 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN6P56747 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN6P56747 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN6P56747 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN6P56747 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CLDN6P56747 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.96■□□□□ 0.63
CLDN6P56747 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN6P56747 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN6P56747 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.95■□□□□ 0.62
CLDN6P56747 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN6P56747 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CLDN6P56747 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN6P56747 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN6P56747 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN6P56747 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CLDN6P56747 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.95■□□□□ 0.62
CLDN6P56747 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN6P56747 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN6P56747 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN6P56747 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN6P56747 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN6P56747 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN6P56747 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN6P56747 AC004980.1-204ENST00000429707 299 ntBASIC18.95■□□□□ 0.62
CLDN6P56747 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN6P56747 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CLDN6P56747 SLC25A1P4-201ENST00000567977 778 ntBASIC18.95■□□□□ 0.62
CLDN6P56747 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CLDN6P56747 AL445675.2-201ENST00000620291 557 ntBASIC18.95■□□□□ 0.62
CLDN6P56747 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CLDN6P56747 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.95■□□□□ 0.62
CLDN6P56747 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CLDN6P56747 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN6P56747 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN6P56747 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.95■□□□□ 0.62
CLDN6P56747 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN6P56747 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN6P56747 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
CLDN6P56747 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN6P56747 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.94■□□□□ 0.62
CLDN6P56747 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CLDN6P56747 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN6P56747 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.94■□□□□ 0.62
CLDN6P56747 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.94■□□□□ 0.62
CLDN6P56747 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.94■□□□□ 0.62
CLDN6P56747 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.94■□□□□ 0.62
CLDN6P56747 AC063952.2-201ENST00000498792 1227 ntBASIC18.94■□□□□ 0.62
CLDN6P56747 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
CLDN6P56747 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.94■□□□□ 0.62
CLDN6P56747 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.94■□□□□ 0.62
CLDN6P56747 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.93■□□□□ 0.62
CLDN6P56747 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CLDN6P56747 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
CLDN6P56747 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN6P56747 KRT8P17-201ENST00000453110 1448 ntBASIC18.93■□□□□ 0.62
CLDN6P56747 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
CLDN6P56747 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN6P56747 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.93■□□□□ 0.62
CLDN6P56747 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN6P56747 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN6P56747 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CLDN6P56747 AC008040.2-201ENST00000461049 708 ntBASIC18.93■□□□□ 0.62
CLDN6P56747 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN6P56747 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.93■□□□□ 0.62
CLDN6P56747 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN6P56747 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.93■□□□□ 0.62
CLDN6P56747 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN6P56747 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.93■□□□□ 0.62
CLDN6P56747 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CLDN6P56747 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN6P56747 AL049796.1-201ENST00000565336 1766 ntBASIC18.93■□□□□ 0.62
CLDN6P56747 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN6P56747 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN6P56747 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN6P56747 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN6P56747 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN6P56747 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN6P56747 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.93■□□□□ 0.62
CLDN6P56747 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.93■□□□□ 0.62
CLDN6P56747 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.92■□□□□ 0.62
CLDN6P56747 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN6P56747 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms