Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.32■□□□□ 0.36
FOXG1P55316 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FOXG1P55316 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.32■□□□□ 0.36
FOXG1P55316 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
FOXG1P55316 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXG1P55316 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.32■□□□□ 0.36
FOXG1P55316 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXG1P55316 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
FOXG1P55316 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXG1P55316 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FOXG1P55316 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.32■□□□□ 0.36
FOXG1P55316 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
FOXG1P55316 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.31■□□□□ 0.36
FOXG1P55316 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.31■□□□□ 0.36
FOXG1P55316 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
FOXG1P55316 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.31■□□□□ 0.36
FOXG1P55316 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
FOXG1P55316 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.31■□□□□ 0.36
FOXG1P55316 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXG1P55316 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
FOXG1P55316 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXG1P55316 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXG1P55316 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.31■□□□□ 0.36
FOXG1P55316 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
FOXG1P55316 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
FOXG1P55316 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.31■□□□□ 0.36
FOXG1P55316 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.31■□□□□ 0.36
FOXG1P55316 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FOXG1P55316 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FOXG1P55316 AC093827.2-201ENST00000512654 315 ntBASIC17.31■□□□□ 0.36
FOXG1P55316 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.31■□□□□ 0.36
FOXG1P55316 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
FOXG1P55316 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FOXG1P55316 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.31■□□□□ 0.36
FOXG1P55316 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXG1P55316 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
FOXG1P55316 AP006587.1-201ENST00000534129 1502 ntBASIC17.31■□□□□ 0.36
FOXG1P55316 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FOXG1P55316 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXG1P55316 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXG1P55316 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.3■□□□□ 0.36
FOXG1P55316 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXG1P55316 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXG1P55316 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
FOXG1P55316 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FOXG1P55316 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.3■□□□□ 0.36
FOXG1P55316 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.3■□□□□ 0.36
FOXG1P55316 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.3■□□□□ 0.36
FOXG1P55316 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
FOXG1P55316 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXG1P55316 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FOXG1P55316 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXG1P55316 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.3■□□□□ 0.36
FOXG1P55316 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.3■□□□□ 0.36
FOXG1P55316 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FOXG1P55316 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.3■□□□□ 0.36
FOXG1P55316 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FOXG1P55316 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.3■□□□□ 0.36
FOXG1P55316 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
FOXG1P55316 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.3■□□□□ 0.36
FOXG1P55316 Z99916.2-201ENST00000604037 246 ntBASIC17.3■□□□□ 0.36
FOXG1P55316 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.3■□□□□ 0.36
FOXG1P55316 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXG1P55316 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXG1P55316 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
FOXG1P55316 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXG1P55316 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXG1P55316 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
FOXG1P55316 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.3■□□□□ 0.36
FOXG1P55316 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXG1P55316 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.3■□□□□ 0.36
FOXG1P55316 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
FOXG1P55316 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
FOXG1P55316 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXG1P55316 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.29■□□□□ 0.36
FOXG1P55316 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.29■□□□□ 0.36
FOXG1P55316 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXG1P55316 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
FOXG1P55316 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXG1P55316 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXG1P55316 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXG1P55316 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXG1P55316 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXG1P55316 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
FOXG1P55316 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.29■□□□□ 0.36
FOXG1P55316 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXG1P55316 AC008550.1-201ENST00000511500 884 ntBASIC17.29■□□□□ 0.36
FOXG1P55316 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FOXG1P55316 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.29■□□□□ 0.36
FOXG1P55316 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXG1P55316 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.29■□□□□ 0.36
FOXG1P55316 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.29■□□□□ 0.36
FOXG1P55316 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.29■□□□□ 0.36
FOXG1P55316 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FOXG1P55316 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FOXG1P55316 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXG1P55316 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXG1P55316 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
FOXG1P55316 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.29■□□□□ 0.36
FOXG1P55316 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms