Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSNK1A1P48729 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.54■□□□□ 0.4
CSNK1A1P48729 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSNK1A1P48729 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.54■□□□□ 0.4
CSNK1A1P48729 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSNK1A1P48729 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.54■□□□□ 0.4
CSNK1A1P48729 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1A1P48729 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CSNK1A1P48729 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.53■□□□□ 0.4
CSNK1A1P48729 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1A1P48729 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1A1P48729 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1A1P48729 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1A1P48729 AC018553.1-201ENST00000616682 1458 ntBASIC17.53■□□□□ 0.4
CSNK1A1P48729 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1A1P48729 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1A1P48729 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CSNK1A1P48729 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1A1P48729 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1A1P48729 RPS2P52-201ENST00000469610 820 ntBASIC17.53■□□□□ 0.4
CSNK1A1P48729 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.53■□□□□ 0.4
CSNK1A1P48729 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.53■□□□□ 0.4
CSNK1A1P48729 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.53■□□□□ 0.4
CSNK1A1P48729 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.53■□□□□ 0.4
CSNK1A1P48729 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.53■□□□□ 0.4
CSNK1A1P48729 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.53■□□□□ 0.4
CSNK1A1P48729 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CSNK1A1P48729 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CSNK1A1P48729 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CSNK1A1P48729 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.53■□□□□ 0.4
CSNK1A1P48729 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CSNK1A1P48729 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.53■□□□□ 0.4
CSNK1A1P48729 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1A1P48729 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1A1P48729 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.53■□□□□ 0.4
CSNK1A1P48729 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CSNK1A1P48729 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1A1P48729 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1A1P48729 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.53■□□□□ 0.4
CSNK1A1P48729 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CSNK1A1P48729 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
CSNK1A1P48729 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1A1P48729 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.52■□□□□ 0.4
CSNK1A1P48729 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CSNK1A1P48729 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CSNK1A1P48729 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.52■□□□□ 0.4
CSNK1A1P48729 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CSNK1A1P48729 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CSNK1A1P48729 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CSNK1A1P48729 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.52■□□□□ 0.4
CSNK1A1P48729 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CSNK1A1P48729 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
CSNK1A1P48729 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CSNK1A1P48729 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CSNK1A1P48729 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.52■□□□□ 0.4
CSNK1A1P48729 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.52■□□□□ 0.4
CSNK1A1P48729 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.52■□□□□ 0.4
CSNK1A1P48729 RNA5SP413-201ENST00000516373 109 ntBASIC17.52■□□□□ 0.4
CSNK1A1P48729 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.52■□□□□ 0.4
CSNK1A1P48729 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.52■□□□□ 0.4
CSNK1A1P48729 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CSNK1A1P48729 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CSNK1A1P48729 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
CSNK1A1P48729 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.52■□□□□ 0.39
CSNK1A1P48729 AC116351.2-201ENST00000606540 1585 ntBASIC17.52■□□□□ 0.39
CSNK1A1P48729 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CSNK1A1P48729 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CSNK1A1P48729 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CSNK1A1P48729 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CSNK1A1P48729 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.52■□□□□ 0.39
CSNK1A1P48729 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.52■□□□□ 0.39
CSNK1A1P48729 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1A1P48729 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1A1P48729 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1A1P48729 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CSNK1A1P48729 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.51■□□□□ 0.39
CSNK1A1P48729 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.51■□□□□ 0.39
CSNK1A1P48729 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1A1P48729 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1A1P48729 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1A1P48729 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.51■□□□□ 0.39
CSNK1A1P48729 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1A1P48729 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1A1P48729 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.51■□□□□ 0.39
CSNK1A1P48729 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CSNK1A1P48729 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1A1P48729 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CSNK1A1P48729 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.51■□□□□ 0.39
CSNK1A1P48729 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.51■□□□□ 0.39
CSNK1A1P48729 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.51■□□□□ 0.39
CSNK1A1P48729 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.51■□□□□ 0.39
CSNK1A1P48729 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1A1P48729 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1A1P48729 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1A1P48729 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1A1P48729 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1A1P48729 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1A1P48729 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1A1P48729 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1A1P48729 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms