Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.63■□□□□ 0.73
CTSKP43235 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CTSKP43235 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.63■□□□□ 0.73
CTSKP43235 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
CTSKP43235 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CTSKP43235 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.63■□□□□ 0.73
CTSKP43235 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.62■□□□□ 0.73
CTSKP43235 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTSKP43235 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTSKP43235 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CTSKP43235 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTSKP43235 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.62■□□□□ 0.73
CTSKP43235 KRT8P9-201ENST00000558927 1449 ntBASIC19.62■□□□□ 0.73
CTSKP43235 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CTSKP43235 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.62■□□□□ 0.73
CTSKP43235 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CTSKP43235 AP000525.1-201ENST00000608286 694 ntBASIC19.62■□□□□ 0.73
CTSKP43235 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.62■□□□□ 0.73
CTSKP43235 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.62■□□□□ 0.73
CTSKP43235 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTSKP43235 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CTSKP43235 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTSKP43235 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTSKP43235 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CTSKP43235 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CTSKP43235 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CTSKP43235 AL049796.1-201ENST00000565336 1766 ntBASIC19.62■□□□□ 0.73
CTSKP43235 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CTSKP43235 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CTSKP43235 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CTSKP43235 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTSKP43235 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.61■□□□□ 0.73
CTSKP43235 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
CTSKP43235 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
CTSKP43235 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.61■□□□□ 0.73
CTSKP43235 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.61■□□□□ 0.73
CTSKP43235 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTSKP43235 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.61■□□□□ 0.73
CTSKP43235 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTSKP43235 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTSKP43235 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.61■□□□□ 0.73
CTSKP43235 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.61■□□□□ 0.73
CTSKP43235 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.61■□□□□ 0.73
CTSKP43235 AL445228.2-201ENST00000605589 952 ntBASIC19.61■□□□□ 0.73
CTSKP43235 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTSKP43235 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTSKP43235 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.61■□□□□ 0.73
CTSKP43235 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.61■□□□□ 0.73
CTSKP43235 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTSKP43235 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTSKP43235 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.61■□□□□ 0.73
CTSKP43235 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTSKP43235 KRT8P20-201ENST00000423953 1409 ntBASIC19.6■□□□□ 0.73
CTSKP43235 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.6■□□□□ 0.73
CTSKP43235 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CTSKP43235 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTSKP43235 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTSKP43235 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTSKP43235 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.6■□□□□ 0.73
CTSKP43235 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
CTSKP43235 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTSKP43235 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTSKP43235 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CTSKP43235 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.6■□□□□ 0.73
CTSKP43235 KSR1P1-201ENST00000446298 240 ntBASIC19.6■□□□□ 0.73
CTSKP43235 AL031963.3-201ENST00000606441 850 ntBASIC19.6■□□□□ 0.73
CTSKP43235 AC092865.7-201ENST00000641832 219 ntBASIC19.6■□□□□ 0.73
CTSKP43235 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTSKP43235 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CTSKP43235 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTSKP43235 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
CTSKP43235 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CTSKP43235 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.59■□□□□ 0.73
CTSKP43235 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTSKP43235 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTSKP43235 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTSKP43235 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTSKP43235 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTSKP43235 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTSKP43235 MIR1238-201ENST00000408483 83 ntBASIC19.59■□□□□ 0.73
CTSKP43235 NIFKP9-201ENST00000419265 221 ntBASIC19.59■□□□□ 0.73
CTSKP43235 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.59■□□□□ 0.73
CTSKP43235 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTSKP43235 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.59■□□□□ 0.73
CTSKP43235 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTSKP43235 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.59■□□□□ 0.73
CTSKP43235 AC116562.2-201ENST00000507042 360 ntBASIC19.59■□□□□ 0.73
CTSKP43235 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.59■□□□□ 0.73
CTSKP43235 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.59■□□□□ 0.73
CTSKP43235 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTSKP43235 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.59■□□□□ 0.73
CTSKP43235 AC005363.2-201ENST00000618631 242 ntBASIC19.59■□□□□ 0.73
CTSKP43235 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CTSKP43235 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTSKP43235 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTSKP43235 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTSKP43235 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTSKP43235 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTSKP43235 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.58■□□□□ 0.73
CTSKP43235 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms