Protein–RNA interactions for Protein: P43026

GDF5, Growth/differentiation factor 5, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF5P43026 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.19■□□□□ 0.66
GDF5P43026 AC018553.1-201ENST00000616682 1458 ntBASIC19.19■□□□□ 0.66
GDF5P43026 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.19■□□□□ 0.66
GDF5P43026 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GDF5P43026 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GDF5P43026 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GDF5P43026 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
GDF5P43026 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GDF5P43026 AC092368.3-202ENST00000574180 1591 ntBASIC19.19■□□□□ 0.66
GDF5P43026 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GDF5P43026 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GDF5P43026 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.18■□□□□ 0.66
GDF5P43026 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.18■□□□□ 0.66
GDF5P43026 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.18■□□□□ 0.66
GDF5P43026 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.18■□□□□ 0.66
GDF5P43026 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
GDF5P43026 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GDF5P43026 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
GDF5P43026 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.18■□□□□ 0.66
GDF5P43026 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
GDF5P43026 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GDF5P43026 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
GDF5P43026 AC069152.1-201ENST00000438030 544 ntBASIC19.18■□□□□ 0.66
GDF5P43026 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.18■□□□□ 0.66
GDF5P43026 AC142086.2-201ENST00000569753 217 ntBASIC19.18■□□□□ 0.66
GDF5P43026 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.18■□□□□ 0.66
GDF5P43026 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.18■□□□□ 0.66
GDF5P43026 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GDF5P43026 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GDF5P43026 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GDF5P43026 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GDF5P43026 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GDF5P43026 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GDF5P43026 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
GDF5P43026 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GDF5P43026 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GDF5P43026 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
GDF5P43026 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
GDF5P43026 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GDF5P43026 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GDF5P43026 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
GDF5P43026 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GDF5P43026 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.17■□□□□ 0.66
GDF5P43026 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.17■□□□□ 0.66
GDF5P43026 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.17■□□□□ 0.66
GDF5P43026 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
GDF5P43026 HLA-B-256ENST00000639848 1089 ntBASIC19.17■□□□□ 0.66
GDF5P43026 AC133041.1-202ENST00000642053 222 ntBASIC19.17■□□□□ 0.66
GDF5P43026 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
GDF5P43026 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
GDF5P43026 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GDF5P43026 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GDF5P43026 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GDF5P43026 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.17■□□□□ 0.66
GDF5P43026 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GDF5P43026 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.16■□□□□ 0.66
GDF5P43026 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GDF5P43026 AC093484.2-201ENST00000580996 2166 ntBASIC19.16■□□□□ 0.66
GDF5P43026 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.16■□□□□ 0.66
GDF5P43026 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.16■□□□□ 0.66
GDF5P43026 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.16■□□□□ 0.66
GDF5P43026 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GDF5P43026 AC116351.2-201ENST00000606540 1585 ntBASIC19.16■□□□□ 0.66
GDF5P43026 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GDF5P43026 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GDF5P43026 AL355802.2-201ENST00000402069 882 ntBASIC19.16■□□□□ 0.66
GDF5P43026 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GDF5P43026 AC073210.2-201ENST00000430369 194 ntBASIC19.16■□□□□ 0.66
GDF5P43026 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GDF5P43026 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.16■□□□□ 0.66
GDF5P43026 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.16■□□□□ 0.66
GDF5P43026 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GDF5P43026 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.16■□□□□ 0.66
GDF5P43026 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GDF5P43026 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GDF5P43026 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
GDF5P43026 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDF5P43026 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
GDF5P43026 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
GDF5P43026 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDF5P43026 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDF5P43026 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDF5P43026 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDF5P43026 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.15■□□□□ 0.66
GDF5P43026 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.15■□□□□ 0.66
GDF5P43026 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDF5P43026 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDF5P43026 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.15■□□□□ 0.66
GDF5P43026 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDF5P43026 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
GDF5P43026 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.15■□□□□ 0.66
GDF5P43026 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDF5P43026 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.15■□□□□ 0.66
GDF5P43026 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.15■□□□□ 0.66
GDF5P43026 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.15■□□□□ 0.66
GDF5P43026 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDF5P43026 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GDF5P43026 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.15■□□□□ 0.66
GDF5P43026 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
GDF5P43026 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms