Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC13.61□□□□□ -0.23
RPL13AP40429 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPL13AP40429 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RPL13AP40429 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPL13AP40429 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPL13AP40429 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
RPL13AP40429 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.6□□□□□ -0.23
RPL13AP40429 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RPL13AP40429 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RPL13AP40429 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPL13AP40429 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPL13AP40429 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC13.6□□□□□ -0.23
RPL13AP40429 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPL13AP40429 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPL13AP40429 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
RPL13AP40429 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.6□□□□□ -0.23
RPL13AP40429 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPL13AP40429 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPL13AP40429 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPL13AP40429 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPL13AP40429 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPL13AP40429 PEMT-206ENST00000435340 960 ntTSL 5 BASIC13.6□□□□□ -0.23
RPL13AP40429 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RPL13AP40429 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
RPL13AP40429 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
RPL13AP40429 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC13.6□□□□□ -0.23
RPL13AP40429 FP700111.2-201ENST00000619190 1892 ntBASIC13.6□□□□□ -0.23
RPL13AP40429 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
RPL13AP40429 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RPL13AP40429 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPL13AP40429 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC13.6□□□□□ -0.23
RPL13AP40429 AC005332.8-201ENST00000622750 2735 ntBASIC13.6□□□□□ -0.23
RPL13AP40429 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPL13AP40429 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPL13AP40429 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RPL13AP40429 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC13.6□□□□□ -0.23
RPL13AP40429 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RPL13AP40429 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL13AP40429 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC13.59□□□□□ -0.23
RPL13AP40429 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RPL13AP40429 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC13.59□□□□□ -0.23
RPL13AP40429 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RPL13AP40429 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC13.59□□□□□ -0.23
RPL13AP40429 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
RPL13AP40429 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RPL13AP40429 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RPL13AP40429 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RPL13AP40429 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL13AP40429 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC13.59□□□□□ -0.23
RPL13AP40429 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL13AP40429 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RPL13AP40429 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL13AP40429 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL13AP40429 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL13AP40429 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
RPL13AP40429 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC13.59□□□□□ -0.23
RPL13AP40429 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.59□□□□□ -0.23
RPL13AP40429 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.59□□□□□ -0.23
RPL13AP40429 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL13AP40429 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL13AP40429 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC13.59□□□□□ -0.23
RPL13AP40429 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL13AP40429 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RPL13AP40429 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
RPL13AP40429 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC13.59□□□□□ -0.23
RPL13AP40429 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
RPL13AP40429 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RPL13AP40429 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC13.59□□□□□ -0.23
RPL13AP40429 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
RPL13AP40429 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
RPL13AP40429 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC13.58□□□□□ -0.23
RPL13AP40429 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
RPL13AP40429 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC13.58□□□□□ -0.23
RPL13AP40429 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RPL13AP40429 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RPL13AP40429 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
RPL13AP40429 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RPL13AP40429 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RPL13AP40429 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RPL13AP40429 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RPL13AP40429 AL136116.3-201ENST00000402907 1138 ntBASIC13.58□□□□□ -0.24
RPL13AP40429 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RPL13AP40429 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC13.58□□□□□ -0.24
RPL13AP40429 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC13.58□□□□□ -0.24
RPL13AP40429 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RPL13AP40429 RALB-208ENST00000631312 311 ntTSL 5 BASIC13.58□□□□□ -0.24
RPL13AP40429 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
RPL13AP40429 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC13.58□□□□□ -0.24
RPL13AP40429 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RPL13AP40429 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
RPL13AP40429 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RPL13AP40429 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
RPL13AP40429 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RPL13AP40429 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
RPL13AP40429 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
RPL13AP40429 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
RPL13AP40429 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RPL13AP40429 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
RPL13AP40429 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC13.57□□□□□ -0.24
RPL13AP40429 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms