Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CLCN1P35523 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC22.36■■□□□ 1.17
CLCN1P35523 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CLCN1P35523 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
CLCN1P35523 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLCN1P35523 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CLCN1P35523 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CLCN1P35523 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
CLCN1P35523 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.35■■□□□ 1.17
CLCN1P35523 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLCN1P35523 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CLCN1P35523 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLCN1P35523 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLCN1P35523 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLCN1P35523 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLCN1P35523 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC22.35■■□□□ 1.17
CLCN1P35523 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC22.35■■□□□ 1.17
CLCN1P35523 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLCN1P35523 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLCN1P35523 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.35■■□□□ 1.17
CLCN1P35523 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CLCN1P35523 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CLCN1P35523 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
CLCN1P35523 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.35■■□□□ 1.17
CLCN1P35523 KRT18P14-201ENST00000534205 1250 ntBASIC22.35■■□□□ 1.17
CLCN1P35523 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLCN1P35523 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC22.35■■□□□ 1.17
CLCN1P35523 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLCN1P35523 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLCN1P35523 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CLCN1P35523 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLCN1P35523 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLCN1P35523 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLCN1P35523 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
CLCN1P35523 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
CLCN1P35523 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLCN1P35523 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
CLCN1P35523 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.34■■□□□ 1.17
CLCN1P35523 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CLCN1P35523 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLCN1P35523 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.34■■□□□ 1.17
CLCN1P35523 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.34■■□□□ 1.17
CLCN1P35523 AC138907.5-202ENST00000569484 235 ntBASIC22.34■■□□□ 1.17
CLCN1P35523 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLCN1P35523 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC22.34■■□□□ 1.17
CLCN1P35523 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC22.34■■□□□ 1.17
CLCN1P35523 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
CLCN1P35523 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLCN1P35523 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
CLCN1P35523 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLCN1P35523 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CLCN1P35523 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CLCN1P35523 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
CLCN1P35523 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC22.33■■□□□ 1.17
CLCN1P35523 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CLCN1P35523 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
CLCN1P35523 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC22.33■■□□□ 1.17
CLCN1P35523 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CLCN1P35523 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.33■■□□□ 1.17
CLCN1P35523 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CLCN1P35523 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.33■■□□□ 1.17
CLCN1P35523 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC22.33■■□□□ 1.17
CLCN1P35523 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CLCN1P35523 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CLCN1P35523 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CLCN1P35523 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
CLCN1P35523 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.16
CLCN1P35523 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CLCN1P35523 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CLCN1P35523 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
CLCN1P35523 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CLCN1P35523 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CLCN1P35523 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CLCN1P35523 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.32■■□□□ 1.16
CLCN1P35523 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
CLCN1P35523 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.32■■□□□ 1.16
CLCN1P35523 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.32■■□□□ 1.16
CLCN1P35523 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CLCN1P35523 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CLCN1P35523 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CLCN1P35523 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CLCN1P35523 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CLCN1P35523 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CLCN1P35523 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.31■■□□□ 1.16
CLCN1P35523 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
CLCN1P35523 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC22.31■■□□□ 1.16
CLCN1P35523 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CLCN1P35523 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLCN1P35523 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
CLCN1P35523 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
CLCN1P35523 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
CLCN1P35523 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CLCN1P35523 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC22.31■■□□□ 1.16
CLCN1P35523 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.31■■□□□ 1.16
CLCN1P35523 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
CLCN1P35523 AL354751.1-201ENST00000412768 1863 ntBASIC22.31■■□□□ 1.16
CLCN1P35523 AP004607.4-201ENST00000530158 1459 ntBASIC22.31■■□□□ 1.16
CLCN1P35523 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.31■■□□□ 1.16
CLCN1P35523 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLCN1P35523 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms