Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 CROCCP5-201ENST00000436658 830 ntBASIC20.39■□□□□ 0.85
PTPN7P35236 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.39■□□□□ 0.85
PTPN7P35236 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN7P35236 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.39■□□□□ 0.85
PTPN7P35236 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.39■□□□□ 0.85
PTPN7P35236 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
PTPN7P35236 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.39■□□□□ 0.85
PTPN7P35236 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN7P35236 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PTPN7P35236 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
PTPN7P35236 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PTPN7P35236 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.39■□□□□ 0.85
PTPN7P35236 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN7P35236 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN7P35236 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PTPN7P35236 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN7P35236 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN7P35236 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN7P35236 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
PTPN7P35236 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PTPN7P35236 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN7P35236 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.38■□□□□ 0.85
PTPN7P35236 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.38■□□□□ 0.85
PTPN7P35236 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN7P35236 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PTPN7P35236 AC005829.2-201ENST00000571422 1056 ntBASIC20.38■□□□□ 0.85
PTPN7P35236 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.38■□□□□ 0.85
PTPN7P35236 AL137784.2-201ENST00000607332 1000 ntBASIC20.38■□□□□ 0.85
PTPN7P35236 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.38■□□□□ 0.85
PTPN7P35236 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN7P35236 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN7P35236 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN7P35236 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN7P35236 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.38■□□□□ 0.85
PTPN7P35236 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN7P35236 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.38■□□□□ 0.85
PTPN7P35236 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PTPN7P35236 TFP1-202ENST00000475455 1573 ntBASIC20.38■□□□□ 0.85
PTPN7P35236 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN7P35236 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.37■□□□□ 0.85
PTPN7P35236 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.37■□□□□ 0.85
PTPN7P35236 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN7P35236 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.37■□□□□ 0.85
PTPN7P35236 AL032819.2-201ENST00000624543 2162 ntBASIC20.37■□□□□ 0.85
PTPN7P35236 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN7P35236 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.37■□□□□ 0.85
PTPN7P35236 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN7P35236 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN7P35236 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.37■□□□□ 0.85
PTPN7P35236 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PTPN7P35236 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.37■□□□□ 0.85
PTPN7P35236 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.37■□□□□ 0.85
PTPN7P35236 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
PTPN7P35236 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.37■□□□□ 0.85
PTPN7P35236 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN7P35236 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN7P35236 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN7P35236 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN7P35236 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.37■□□□□ 0.85
PTPN7P35236 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.37■□□□□ 0.85
PTPN7P35236 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN7P35236 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN7P35236 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN7P35236 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PTPN7P35236 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.36■□□□□ 0.85
PTPN7P35236 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.36■□□□□ 0.85
PTPN7P35236 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN7P35236 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.36■□□□□ 0.85
PTPN7P35236 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.36■□□□□ 0.85
PTPN7P35236 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.36■□□□□ 0.85
PTPN7P35236 AC092118.2-201ENST00000613495 667 ntBASIC20.36■□□□□ 0.85
PTPN7P35236 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN7P35236 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN7P35236 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.36■□□□□ 0.85
PTPN7P35236 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN7P35236 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PTPN7P35236 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN7P35236 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN7P35236 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.36■□□□□ 0.85
PTPN7P35236 AC098818.2-201ENST00000564925 2320 ntBASIC20.36■□□□□ 0.85
PTPN7P35236 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PTPN7P35236 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN7P35236 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN7P35236 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN7P35236 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.35■□□□□ 0.85
PTPN7P35236 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN7P35236 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN7P35236 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN7P35236 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.35■□□□□ 0.85
PTPN7P35236 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN7P35236 MIPEPP3-201ENST00000412105 444 ntBASIC20.35■□□□□ 0.85
PTPN7P35236 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PTPN7P35236 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.35■□□□□ 0.85
PTPN7P35236 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN7P35236 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PTPN7P35236 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN7P35236 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PTPN7P35236 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN7P35236 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN7P35236 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms