Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
MMP8P22894 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MMP8P22894 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MMP8P22894 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MMP8P22894 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.77■□□□□ 0.92
MMP8P22894 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.77■□□□□ 0.92
MMP8P22894 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
MMP8P22894 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.77■□□□□ 0.92
MMP8P22894 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MMP8P22894 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
MMP8P22894 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
MMP8P22894 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
MMP8P22894 AC116562.4-201ENST00000641316 2276 ntBASIC20.76■□□□□ 0.91
MMP8P22894 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
MMP8P22894 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.76■□□□□ 0.91
MMP8P22894 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MMP8P22894 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MMP8P22894 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.76■□□□□ 0.91
MMP8P22894 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.76■□□□□ 0.91
MMP8P22894 UNC93B4-201ENST00000505679 747 ntBASIC20.76■□□□□ 0.91
MMP8P22894 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
MMP8P22894 AC008687.6-201ENST00000596318 630 ntBASIC20.76■□□□□ 0.91
MMP8P22894 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
MMP8P22894 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
MMP8P22894 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MMP8P22894 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.76■□□□□ 0.91
MMP8P22894 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MMP8P22894 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
MMP8P22894 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MMP8P22894 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MMP8P22894 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
MMP8P22894 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
MMP8P22894 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MMP8P22894 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
MMP8P22894 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.75■□□□□ 0.91
MMP8P22894 UNC93B5-201ENST00000530315 699 ntBASIC20.75■□□□□ 0.91
MMP8P22894 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MMP8P22894 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MMP8P22894 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
MMP8P22894 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MMP8P22894 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
MMP8P22894 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
MMP8P22894 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
MMP8P22894 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.75■□□□□ 0.91
MMP8P22894 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
MMP8P22894 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MMP8P22894 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.74■□□□□ 0.91
MMP8P22894 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.74■□□□□ 0.91
MMP8P22894 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MMP8P22894 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
MMP8P22894 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MMP8P22894 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MMP8P22894 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MMP8P22894 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.74■□□□□ 0.91
MMP8P22894 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.74■□□□□ 0.91
MMP8P22894 AC093484.2-201ENST00000580996 2166 ntBASIC20.74■□□□□ 0.91
MMP8P22894 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MMP8P22894 AL121906.2-201ENST00000621597 723 ntBASIC20.74■□□□□ 0.91
MMP8P22894 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.74■□□□□ 0.91
MMP8P22894 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
MMP8P22894 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.74■□□□□ 0.91
MMP8P22894 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MMP8P22894 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
MMP8P22894 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MMP8P22894 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
MMP8P22894 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
MMP8P22894 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
MMP8P22894 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.73■□□□□ 0.91
MMP8P22894 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MMP8P22894 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
MMP8P22894 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.73■□□□□ 0.91
MMP8P22894 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MMP8P22894 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MMP8P22894 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MMP8P22894 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
MMP8P22894 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
MMP8P22894 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.72■□□□□ 0.91
MMP8P22894 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MMP8P22894 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MMP8P22894 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MMP8P22894 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.72■□□□□ 0.91
MMP8P22894 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.72■□□□□ 0.91
MMP8P22894 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.72■□□□□ 0.91
MMP8P22894 AL121829.2-201ENST00000620908 328 ntBASIC20.72■□□□□ 0.91
MMP8P22894 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MMP8P22894 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MMP8P22894 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.72■□□□□ 0.91
MMP8P22894 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MMP8P22894 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MMP8P22894 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MMP8P22894 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.72■□□□□ 0.91
MMP8P22894 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.72■□□□□ 0.91
MMP8P22894 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.72■□□□□ 0.91
MMP8P22894 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.72■□□□□ 0.91
MMP8P22894 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP8P22894 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP8P22894 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP8P22894 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.71■□□□□ 0.91
MMP8P22894 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.71■□□□□ 0.91
MMP8P22894 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms